Pseudoliparis swirei (Mariana hadal snailfish): 130189090
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Entry
130189090 CDS
T09868
Name
(RefSeq) homeobox protein Hox-B1a-like
KO
K09301
homeobox protein HoxA/B/D1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130189090
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
130189090
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
SR-25
Motif
Other DBs
NCBI-GeneID:
130189090
NCBI-ProteinID:
XP_056263724
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Position
23:complement(21668693..21671892)
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AA seq
394 aa
AA seq
DB search
MDNMNSFVEYSIGNRPGTGASGYNPYHHHLHQHHPLEQHQGFPVTSGPFHAGPTGSPAPV
KGTRGDSGTVGAAYTGDARLYGGSGAAVDPQQHQQHHHHHHEQQEHHQQTHSGYHQQLHP
GQSLQSGTPSAYNTGSSGGTGAYVGQACSTSPEYSSPANTVHPQYFMEEPVASSYYHQSS
FPSSAPTVGPSYGALAGAYCGPQGALAGPQYPQQLGGGLDAAGYLGLQHGGGYGELPVCQ
DRERGDEEGHQAGQGQTFDWMKVKRNPPKTAKVSDFGLAGAAHSSSAMRTNFSTRQLTEL
EKEFHFSKYLTRARRVEIAATLELNETQVKIWFQNRRMKQKKREREGASATARSSSSSSS
SSSSGADGGFNKDPEDTDHSSAPTSPGASPSSET
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatgaactcgtttgtggaatactccatcggtaaccgaccgggcaccggcgcg
tccggttacaacccgtatcaccaccatctgcaccaacaccaccctctggagcagcaccag
ggcttcccggtgacctccgggcctttccacgcggggcccaccggctccccggctcccgtt
aaaggcacgagaggtgacagcggcaccgtgggagccgcgtacaccggggatgcgcggctg
tacgggggctctggggccgcggtggaccctcagcagcatcagcaacatcatcatcatcat
catgaacagcaggagcatcaccagcagacgcacagcggctaccatcagcagctgcacccg
ggccagagcctccagagcgggacaccgtcggcctataacaccgggagcagcggcggcacc
ggggcctacgtgggccaggcgtgctccacgagccccgagtattctagccctgccaacacc
gtgcacccccagtacttcatggaggagcccgtggcctcctcctactatcatcaatcaagc
ttccccagctcggcccccaccgtcgggcccagctacggggctctggccggggcctactgc
gggccgcagggcgcgctggccgggccgcagtacccgcagcagctcggcgggggtctggac
gcggcgggctacctgggccttcagcacgggggaggctacggggagctgccggtgtgccaa
gaccgggagaggggggacgaggagggccaccaggccgggcaagggcagaccttcgactgg
atgaaggtgaagaggaacccgccgaaaacagccaaagtgtcggacttcggcctcgcgggc
gcggcgcacagcagcagcgcgatgcgcaccaacttcagcacgcggcagctcaccgagctg
gagaaggagttccacttcagtaagtacctgacgcgcgcgcgccgcgtggagatcgccgcc
acgctcgagctcaacgagacgcaggtgaagatctggttccagaaccggcgcatgaagcag
aagaagcgcgagcgcgagggcgccagcgccacggcgcgctcctcttcatcctcctcatcc
tcctcttcctccggggccgatggaggattcaacaaggacccggaggacaccgatcactcc
tccgcgcccacgtctccgggcgcgtccccgagctcggagacgtag
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