Pseudoliparis swirei (Mariana hadal snailfish): 130189094
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Entry
130189094 CDS
T09868
Symbol
samd9l
Name
(RefSeq) sterile alpha motif domain-containing protein 9-like
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130189094 (samd9l)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Others
Others
130189094 (samd9l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_KIDINS220
SAM_PNT
SAM_3
TPR_19
SLFN_AlbA_2
Motif
Other DBs
NCBI-GeneID:
130189094
NCBI-ProteinID:
XP_056263731
LinkDB
All DBs
Position
23:complement(10222429..10232722)
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AA seq
1542 aa
AA seq
DB search
MADELEQSPKGWTESQVSDWLRSIGVKKQYIEKLYEEEVNGQVLLSLNEDDLKSKMGMKS
GPAHLIIQTRDELINSKKKSQEKKKTSSGKTPQLEQEHIDAKSVQCLPATSEATPAQIPK
KDEAVVKDRQTAQELNVSTSKDDCRPRPFDQEAIDFIYVKHRVIQPESGAFNLISPCHEF
KSLAKAVTLDRTRLQAKFAYEVLRFATGCMNIRSNGTIHFGVMDSKEGTGNVHGEIIGIP
VPEKDIYVDALDYIERSFSSSKEHVRQCIRPPRFIEVMDGESTEKRYVVEVDIVPSISIV
KNKVYEVRLPNFKESSNKVEFEKETILRRVGAKTEPVTDISDFHERVKDRDAQREEAEKT
LFLGAPDCCQDLGRKLKMLMTSGKKFIEKEKWFILVTNKFNPDDLRNLDWLLNMTMFCVF
DFDPDSKVSGLCSQYRQHHVANIHSLQSYRISSDMSIQEFTTHLHLFDQTSWIFCNGRSD
YKGDDSPCNEMTWFKTKMTVLREAVSLICKQILPKGTFQVIFLLTSPVEKPLLHTFNEFF
TDMEGHEDIICICESEKNFQKWQSFTEGSCGTETVNNSSVVGMKMSHINATLEQIQSVNV
CARKHLPVFVKGTCLLETHEEEKMYSLEILTVDHCDETSQAFIEEEKENIDQQFYHGGRI
NWLNLWLAEHRHVGEVIERDAYQDVSNCVNDSLKSNADQTPVNSINIFHHPGSGGSTVAR
QVLWNNRKGLRCAVVKPSYSPAVVAQHAVELREYEEKDPQRCLPVLLLIEDSDREYLDDL
RNELEVATNAKRILCGTLCFILMSCRRSHDPEKRCKESPLQNVSVTHKLSEQEKRQFAKK
RKVLEEHYEHEFILTFVLMSEGFDKKYVQQFVKHLLQGLDSTSLVTSLILYVALLNTYVQ
NSFISQSHCEEFLGNFLIHLERFRQHEFEKSLGDQAKLIFLHLRDDKTHIKSIRIIHPLV
AKEILEQLLGDKQTQSSLAMSLLCNTVLFEHRFGRAEYLSFLKALLITRSRISKGDKYDS
FFSPLIVHVREKEKSPDKAIELLTKAFQCFHNDPFFAQQLARLHYTDEKFEEAKYWAETA
AQQLPKNSYILDTKGQVYKKWFEAKCKAIENDRVQKTPENIADAVATALKALECFQECEK
AAEADPERNNSSGFFSEVEVGCSVLKLISSSEVFANRANGHSECMKYLSTPEYIPEEVEN
AWAPFHDGLKKLNKAMQDALDWISEDLSYFQTDIGFDGEETPESHEEKISHPLKWLAKKS
SEYGKYFSETALQRKSIATNLTPFQKRMIIYRLGGGNMTSILFNLTDQKDAVTLLETILS
LYPRNPKMAKFGQRDIVNYIMANLTLNCLSPTIKKIAQLKDLQELCHQFPKDKGTCLSSG
LFLRTLLFWPEDHDPDNEKETKYEIVQAAVDQLKKDYLIKMKDIPQRKRRLYTHFFLGSG
NGLDKFVHKRKFESVTKMFSVSEKRMKWFRGEAWKKPEIATMLNCVSGWTEDGQVYLEGP
RKRKFNILPLHLPSVPHSNENITFYLGFTFRGPVACNILVKQ
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaacttgagcagtcacccaagggttggactgaatctcaagtaagcgactgg
ctaagatcaattggagtgaagaagcagtacatagaaaagctctacgaggaagaggtcaat
ggacaagtccttctgtcactgaatgaggacgatttgaagtcaaagatgggcatgaaatca
gggcctgctcatttgattattcagacaagagatgagctcattaactccaagaaaaagtct
caagagaagaagaagacatccagtggcaaaaccccccagttggaacaagaacacattgat
gcaaaatctgttcaatgtcttcccgcaacaagtgaagctactccggcacagattcctaag
aaagatgaagctgtcgtaaaggaccgacaaacagctcaggaactaaatgtgtccacttca
aaagacgactgcagaccacggccatttgaccaagaagcgattgatttcatatatgtaaag
cacagagtcattcaacccgaatcgggtgcttttaatctgatatctccatgccatgaattc
aaatctttagctaaagctgttacgttggatcgcacaagactccaagctaagtttgcctat
gaggtccttagatttgcaactggctgtatgaatatcagatcaaatggcacaatacacttt
ggtgtgatggacagcaaagagggcacaggaaatgtccacggtgagataattggtatccct
gttccagagaaagacatttatgtagatgctttggactacattgaaaggagtttctcttct
tccaaagagcatgtacgccagtgtatacggccaccaaggttcattgaggttatggatggc
gaaagtacagaaaagaggtatgtggtagaggttgacattgtgccttcaataagtattgtg
aagaacaaagtgtatgaagtgcgtctgccaaacttcaaagagtcatcaaacaaagtagaa
tttgagaaagaaacaattctgcggcgggtgggtgcaaagacggaaccggtgaccgacata
agtgattttcacgaacgagtcaaagatcgagacgctcaaagagaagaagcagagaaaact
ctgttcctcggtgccccagactgctgccaagacctcgggaggaaactaaaaatgcttatg
acttctggaaagaaattcatcgaaaaggagaaatggttcatcctcgtcactaacaagttc
aaccctgatgaccttcgcaaccttgactggctgcttaacatgaccatgttctgtgtgttt
gactttgacccagactcaaaggtctcaggtctttgcagtcagtaccgtcagcatcacgtg
gcaaatattcattctctgcagagctataggatatccagtgacatgagcatccaagaattc
acgactcatttgcatctgttcgaccaaactagctggatcttttgtaacggccgtagtgac
tacaaaggagatgacagtccatgtaatgaaatgacttggtttaagacaaaaatgactgtc
ctgcgggaagctgtgtctttgatctgtaaacaaatcttgccaaaagggacattccaagtc
atttttcttctcacatcaccagttgagaaaccactcttgcacacctttaatgagtttttc
acagacatggaaggccatgaagacatcatctgcatctgtgaatcagagaaaaacttccag
aagtggcaaagctttacagaggggtcatgtggaacagaaactgtgaacaattccagtgtt
gttgggatgaaaatgagtcacattaatgcaactctagagcaaatacaatctgtcaacgta
tgcgcaagaaaacacctgccagtctttgtgaaggggacatgtcttcttgaaacacacgaa
gaggaaaagatgtattctctggaaattctgacagtcgatcattgtgacgaaacaagccaa
gccttcattgaggaagagaaagagaacattgaccagcagttttaccatggtggtcgaata
aactggttgaatttatggcttgctgagcaccggcatgttggagaggtaattgaaagagat
gcttatcaggatgtctccaattgtgtcaatgactctttgaagtcgaatgctgatcaaact
ccagtgaacagtataaacatcttccatcacccaggaagtggtggaagcactgtcgcaaga
caagtgctgtggaacaacaggaaaggtctcaggtgtgcagttgtaaagccctcatactct
cctgctgtggttgcgcaacatgcagttgaactgagagaatacgaggagaaagatccacag
aggtgtcttcctgtgctgctcctcattgaagactcagacagagaatacctcgatgatctc
aggaacgaactggaggttgccacaaacgccaaaagaatcctgtgtggaactctgtgtttc
attttgatgagctgcagacgatcccatgatccagagaaaagatgcaaagagtctccgtta
cagaacgtgtctgtcactcacaaactgtctgaacaagagaagagacagtttgccaaaaaa
cgaaaggtgcttgaggaacattatgaacatgagttcatcctgacatttgttctgatgagt
gaaggattcgataagaagtatgttcaacagtttgtcaaacatttgctgcaaggccttgac
agtacatctcttgtgactagcctcattctttatgtggcattgctgaacacttatgttcaa
aactcgttcatctctcagtcccattgtgaagagtttcttggaaactttctcattcacttg
gaaaggtttcgccaacatgagtttgagaaatccctcggtgatcaggctaaactaatcttc
ttgcatctcagagatgataagacacacattaaatcgatcagaatcatccacccactcgtt
gcaaaggaaattctcgagcaacttttgggggacaaacagacccaaagcagtttggcaatg
agtttgctgtgcaacaccgtgctttttgagcacagatttggaagagctgaatatctgtca
tttttgaaagcactgttgataacgcgatccagaataagcaaaggggacaaatatgacagt
tttttctctcctctgattgtgcatgtgcgtgaaaaggaaaaaagcccagacaaagcaatt
gagttactcacgaaagcgttccagtgtttccataacgatccattctttgcgcaacaactt
gcacgtcttcattacaccgacgaaaagtttgaagaggccaaatactgggccgagacagca
gcccaacagttgcccaaaaactcgtacatactcgacacaaaagggcaggtgtacaagaaa
tggttcgaagctaaatgcaaagctattgagaatgacagagtacaaaagacacccgagaat
atagcagatgccgtggcgactgcactgaaagccctggagtgttttcaggaatgtgagaaa
gcagctgaagcagatccagaaagaaataatagctcagggtttttctctgaagttgaggtt
ggatgcagtgtgctcaaactgatctcttcatcggaagtgtttgcaaacagagccaatggc
cattcagagtgtatgaagtacctgtcgacaccggagtacattcctgaggaagttgaaaac
gcctgggcaccatttcatgatggtttgaaaaaactcaacaaggcaatgcaagatgccctc
gattggatttcagaagacctcagttacttccaaacagacatcggttttgatggagaagag
acccctgaaagtcacgaggagaaaataagtcatccactgaaatggttggcaaaaaaatct
tcagagtatgggaaatatttcagtgaaactgcacttcaacggaaatcaatcgcaaccaat
ctgactcctttccaaaagcgcatgatcatctatcgtcttggtggggggaacatgacatct
atcctcttcaacctaactgaccagaaggatgcagtaactctcctcgagaccatcctttct
ctctaccccagaaatccaaaaatggctaaatttggtcaaagggatattgtcaattacata
atggccaaccttactctgaactgcctgtcaccaacgatcaaaaagatcgctcagctgaaa
gatctgcaggaactttgtcatcagttcccaaaagataaagggacatgtttatcgagtggc
ctcttcttgcgtaccttgctattctggccggaggatcatgacccagataatgagaaagaa
acaaaatatgaaattgtgcaagcggctgttgaccaactaaaaaaagactacttgatcaag
atgaaggacattcctcagaggaaaagaaggctttacacccatttctttctgggcagtggg
aacggactggataaatttgtccacaagagaaagtttgaaagtgtcacaaagatgttctca
gtttctgagaaacgcatgaagtggtttaggggtgaggcatggaaaaagcctgagattgcc
acaatgctgaattgcgtttctggatggactgaagatggacaggtgtaccttgaaggccct
cggaaaaggaagttcaatatcctgcctcttcacctaccatcagtgcctcatagtaatgaa
aacatcacgttctacctggggttcacattcagagggccagttgcctgcaacatccttgtg
aaacaatag
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integrated database retrieval system
