Pseudoliparis swirei (Mariana hadal snailfish): 130189141
Help
Entry
130189141 CDS
T09868
Symbol
prkcsh
Name
(RefSeq) glucosidase 2 subunit beta
KO
K08288
protein kinase C substrate 80K-H
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130189141 (prkcsh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pswi04091
]
130189141 (prkcsh)
Lectins [BR:
pswi04091
]
P-type lectins
130189141 (prkcsh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRKCSH-like
PRKCSH_1
PRKCSH
Ldl_recept_a
EF-hand_7
EF-hand_5
EF-hand_1
BPS1
DUF7365
Motif
Other DBs
NCBI-GeneID:
130189141
NCBI-ProteinID:
XP_056263800
LinkDB
All DBs
Position
23:complement(6654433..6660905)
Genome browser
AA seq
533 aa
AA seq
DB search
MVSCQILLLLLLLSVGVSAVEVQRPRGVPLSKRQFYEEGNPFTCLDGSRTIPFDRVNDDY
CDCQDGSDEPGTSACPNGSFHCTNAGFRSGFIPSSRINDGICDCCDATDEYNSGAACQNT
CRDMGRKEREGMQKMAEIAKEGFMLKQQLIQESKRGLEEKKAKHADIEVNKNDLEKTVEA
LRTVKETAEQPEKEAKERHLKAWEDQKAVIQMAKDKVKMAEVFVELDDDADGFVSVAELL
SHSELDSDSEDSFTDAEAQGLLGGVDQVDSAAFESVWNVIKEKYKSEAIPDPPAPVETPP
EEVREPESDNDSELYPEEDIPDEEEDDEEEDEEVDSDDRDFKSPPPTQTQEKKDDDDEGT
MPSYDEETQSLIDAAQKARDAFDEAEKALQEVDDQIKNLEKEISFDFGPTAEFAYLYSQC
YELTTSEYIYRLCPFNRVTQKPKFGGSETNLGSWGQWAGPEDNLYSVMKYDHGTGCWQGP
NRSTTIKVTCGKDTVLVSTSEPSRCEYLMEFISPAVCQEPSSLDSELHDHTEL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcctgtcagatcctgctgctgctgctgctgctgagtgtgggagtctcggcggtg
gaagtccaacgccctcgcggagtccctttgtcaaaacggcagttctatgaagagggaaac
ccttttacttgcctggatggctcccgcactattccctttgacagagtgaatgacgactac
tgcgactgtcaggacggctctgatgagccaggcacttctgcttgtcccaatggcagcttc
cactgcaccaatgcaggtttcagatctggcttcatcccttcctcccgcatcaatgacgga
atctgtgactgctgtgacgcaacagatgagtacaacagtggtgctgcctgtcagaacacc
tgcagggacatggggcgcaaagagagagagggcatgcagaagatggcagagatcgccaag
gagggctttatgcttaaacaacaacttatccaggagtccaagaggggcctcgaggagaag
aaggccaaacatgcagatattgaggttaataagaatgatttggagaagacggttgaggct
ctgagaactgtgaaggagaccgctgagcagccagagaaagaagccaaagagcgccatcta
aaggcctgggaagatcaaaaggctgttattcaaatggcgaaggacaaggttaaaatggct
gaggtgtttgtggaactggacgatgatgcagacggctttgtctcggtggcggagcttctg
tcccactctgagctcgactcggattcagaggattcattcacagatgcagaagctcaggga
ctgttgggaggagtggaccaagtggactctgcagcttttgagtccgtttggaatgttatc
aaagaaaaatacaaatccgaggccatcccagaccccccagcgccggtggagactccaccg
gaggaggtcagggagccagagtctgacaatgactccgagttgtaccctgaggaagacatc
ccagacgaagaagaggacgatgaagaagaggacgaagaagttgactcggatgacagagac
tttaagagccctcctcccacacagacccaagagaagaaggatgacgatgatgaggggacc
atgccgagttacgacgaagaaacgcagagcctcattgatgctgctcagaaagccagggat
gcattcgacgaggcagagaaagctctccaggaagtcgatgatcagatcaagaacctcgag
aaggaaatctccttcgactttggacccactgctgagtttgcctacctctatagccagtgt
tacgagttgactacgagcgagtatatctacaggctttgtccattcaacagagttacacag
aaacccaagtttggtggatcagaaactaacctcggctcatggggacaatgggccggtccc
gaagacaacctctactctgtgatgaagtatgaccatgggacagggtgctggcaaggcccc
aaccgatccaccacgattaaagtgacgtgtggaaaagacaccgttctggtctctacctcg
gagcccagtcgctgcgagtacctgatggagttcatcagccctgctgtctgccaggagccc
tcaagcctggattcggagcttcatgaccacacggagctctaa
DBGET
integrated database retrieval system
