Pseudoliparis swirei (Mariana hadal snailfish): 130189144
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Entry
130189144 CDS
T09868
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00260
Glycine, serine and threonine metabolism
pswi00630
Glyoxylate and dicarboxylate metabolism
pswi00670
One carbon pool by folate
pswi01100
Metabolic pathways
pswi01200
Carbon metabolism
pswi01230
Biosynthesis of amino acids
pswi01240
Biosynthesis of cofactors
pswi04981
Folate transport and metabolism
Module
pswi_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
130189144 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
130189144 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
130189144 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
130189144 (shmt1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
130189144 (shmt1)
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GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
130189144
NCBI-ProteinID:
XP_056263806
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Position
23:complement(17723096..17730194)
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AA seq
484 aa
AA seq
DB search
MSSPNVSDVAVSKETWDSHNKMLLEPLAIGDSEVFSIIKKEKHRQTFGLELIASENFASR
AVLEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDPERWAVNVQPYS
GSPANFAVYTAVVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETG
YIEYDRLQENARLFHPRLIIAGMSCYSRNLDYGRLKQIADENGAYLMGDMAHISGLVAAG
VVPSPFEYCDIVTTTTHKTLRGCRAGLIFCRKGVRSVDAKGKETLYNLESSINQAVFPGL
QGGPHNHAIAGVAVTLKQAMTSEFKAYQVQVLANCKSLYSALIDHGYKIVTGGSDNHLIL
LDLRTKGTDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALTSRGMMEDDFKK
VAEFIHRGIELTLEVQRSLDPKANLKEFVQALAKGEKFQQQVSEIRAEVEAFAGQFPMPG
LPEL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaccaaatgtgagtgacgtcgctgtgagcaaagaaacgtgggattcgcacaac
aagatgctgctggagccgctcgccattggcgactctgaggtgttctccatcataaagaaa
gagaagcacaggcagacgttcggtctggagctgatagcgtcggaaaactttgccagcaga
gccgtgctggaggcgctgggctcctgcatgaacaacaaatactctgagggatatcccggt
cagaggtactacggaggtacggagcatgtggatgagctagagaggctctgccagaagagg
gcgctagaggcctacggtctggacccggagagatgggccgtcaacgtgcagccgtactca
ggttcacctgctaactttgccgtctacactgccgtcgtggagccccatggaaggatcatg
gggctggaccttcctgacggaggtcacctgacacacggcttcatgacggagaagaagaaa
atctccgccacgtccatcttctttgagtccatgccgtacaaggtgaatccagagaccggc
tacatcgagtatgaccgactgcaagaaaacgctcggctgttccaccccagactcatcatt
gcaggtatgagctgctattcccgtaacctcgactacggccgcctgaagcagatcgccgat
gagaacggcgcgtacctgatgggcgacatggctcacatcagcgggttggtggctgccgga
gtggtgccctcaccctttgagtactgtgacatcgttaccacgacaacgcacaagacgctg
cgtggctgccgcgccggactcatcttctgcaggaaaggcgtgcgtagtgtcgacgccaag
gggaaggaaactctgtacaacttggagtcctcgatcaaccaggctgtgtttccagggctg
cagggaggaccacacaaccacgccattgcaggtgttgctgtcactctcaagcaagccatg
acgtcagagttcaaggcctaccaggtgcaggttctcgctaactgcaaatctctgtacagc
gcgctcatcgaccacggctacaagatcgtcaccggcggctctgacaaccatctgatcttg
cttgaccttcgcaccaaagggaccgatggaggacgagcggagaaggttttggaagcctgt
gccattgcttgtaataagaacacctgtccaggggataagagtgctctgcggcccagcggt
ctgcggtttggctctccggctctgacctccagaggcatgatggaggacgatttcaagaag
gtggccgagttcattcacagaggcattgagctgaccttggaggtgcagaggagcctggat
cccaaggccaatctgaaggagttcgtccaggcgctcgccaagggtgagaagttccagcag
caggtgtcagaaatccgggccgaggtggaggctttcgccggccagttccccatgccgggc
ctccccgagctgtag
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