Pseudoliparis swirei (Mariana hadal snailfish): 130189155
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Entry
130189155 CDS
T09868
Name
(RefSeq) protein Hook homolog 2-like
KO
K16611
protein HOOK2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130189155
03036 Chromosome and associated proteins [BR:
pswi03036
]
130189155
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130189155
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
130189155
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
130189155
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Hook proteins
130189155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK
HOOK_N
MG280
Baculo_PEP_C
HALZ
CH_2
DUF4231
Motif
Other DBs
NCBI-GeneID:
130189155
NCBI-ProteinID:
XP_056263829
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All DBs
Position
23:19493794..19507968
Genome browser
AA seq
712 aa
AA seq
DB search
MSLDKAEPCDSLLTWIQTFRVPSSTSKEDLTSGVAVGHVLHRIDPSWFNETWLGRIKEDS
GDNWRLKVSNLKKILKSMLDYYHDVLDHQISDVHMPDVNLIGEMGDVTELGKLVQLVLGC
AVSCEKKQEQIRQIMTLEESVQHVVMTAIQELLSKEPLSEPGSPETYGDFDYQSRKYYFL
SEEADEKMDLRQRCRDLEHQLSAALEEKSFLQAETRSLKEKLSGCDSLDASASAITGKKL
LLLHSQMEQLQEENYRLDNSRDDMRVRSEILEREVVYLQLRNEELTSLAQEAQALKDEMD
ILRHSSDRVNQLEALVETYKRKLEDLGDLRRQVRLLEERNTVYMQRTCELEEELRRANAV
RSQLDAYKRQVHELHARHSAEAMKAEKWQFEYKNLHDKFDAMQKEKEHLVSERDTLRETN
DELRCAQVQQRCFSASGDLCDSGVTVGNLAAEIMPTELKETVVRLQSENKMLCVQEETYR
QRLVAVQTELEEAQRGKNVLETLNRLNEQQISELRSQIEELQKTLHEQDSRVSSVLSSLL
KKKLEEHLEKLHEAHSDLQRKKEELDDLEPKVDGNMVKKIDELQASLRKKDEDMKQMEER
YKRYAEKARTVIKTLDPKTQPVPGTPDVQALKNQLTEKQRKIKHLQHDYDKSRARHDQEE
KLIISAWYNMGMALHQRVSGERLGPSNQAMSFLAQQRQSTNARRGLTRLHPR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggacaaagcagagccgtgtgactcactgctgacctggatccagacgtttcgg
gtgccgtcgtccaccagcaaggaggacctgacgagcggggtggccgttggacacgtgctg
cacagaatagacccctcttggtttaatgagacgtggctgggcaggatcaaggaggacagc
ggggacaactggcgcctcaaggtcagcaacttaaaaaagattcttaagagcatgctggac
tattaccatgacgtgctcgaccaccagatatcggatgtgcacatgccagacgtgaacctt
atcggggagatgggagacgtcactgaactgggcaagctggtgcagctcgtactgggttgt
gctgtcagctgtgagaagaaacaagagcaaatccggcagataatgacacttgaggaatct
gtccagcacgtcgtgatgacagccattcaggagctcttatcaaaggagcctttgtctgaa
cctgggagcccagagacctacggggactttgactaccagtccaggaagtattactttcta
agcgaggaggcagacgagaagatggacctgagacagcgatgtcgagacctggaacatcag
ctgtcggcggctctggaggagaagtcgttcctccaggcggagacgcgctcgctgaaggag
aagctgagtggctgcgactctctggacgcctccgcctcggccatcaccggcaagaagctg
ctgctgctgcacagccagatggagcagctgcaggaggagaactacaggctggataacagc
agggatgacatgcgtgtgcggagcgagatactggagcgcgaggtggtctacctgcagctg
cggaacgaggagctgaccagcctggcgcaggaggcccaggcgctcaaagacgagatggac
atcctcaggcactcgtctgaccgggtgaaccagctggaggcgctggtggagacgtacaag
aggaagctggaggatctgggagacctgcgccggcaggtgcgcctcctggaggagcgcaac
acggtgtacatgcagcgcacctgcgagctggaggaggagctgcgccgggccaacgccgtc
cgcagccagctggacgcctacaagagacaggtccacgagctccacgccaggcactcggcc
gaggccatgaaggcggagaaatggcagtttgagtacaagaacctccacgacaagtttgac
gcaatgcagaaagagaaagaacacctggtctccgagagagacaccctgcgcgagaccaac
gacgagctccgctgcgcccaggtccaacagcgctgtttcagtgcatctggagacttgtgt
gacagcggtgtcacagttggaaacctcgctgcggagatcatgcccactgagctcaaggag
acggtggtgcgtctgcagagcgagaacaagatgctgtgcgtccaggaggagacgtaccgg
cagaggctggtggcggtgcagacggagctggaggaggcgcagcgcggcaagaacgtcctg
gagactctcaacagactcaacgagcagcagatctcagagctgcgttcccagatcgaggag
ctccagaagacgctgcacgagcaggactcccgtgtgtcctctgtcctctcctctttactg
aagaaaaagcttgaggagcatttggagaagctccacgaagcgcactctgacctccagagg
aaaaaggaggagctcgacgacctcgagcccaaagtggacggcaacatggtgaagaagata
gacgagctccaggcgagcctgcggaagaaggacgaggacatgaagcagatggaggagcga
tacaagcgctacgcggagaaggcgagaacggtgatcaaaacgctggacccaaagacgcag
ccggtaccgggcacgccggacgttcaggcgctgaagaaccagctgacggagaaacagaga
aagatcaaacacctgcagcacgactacgacaagagccgagcgcggcacgaccaggaggag
aagctcatcatcagcgcgtggtacaacatgggcatggcgttgcaccagagggtgtccggc
gagcggctcggcccctccaaccaggccatgtccttcctcgcccagcagagacagtccacc
aacgcccggagaggcctgacccgactccacccgagatga
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