Pseudoliparis swirei (Mariana hadal snailfish): 130189156
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Entry
130189156 CDS
T09868
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130189156
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130189156
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GFIT
Other DBs
NCBI-GeneID:
130189156
NCBI-ProteinID:
XP_056263830
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Position
23:9870440..9882456
Genome browser
AA seq
2167 aa
AA seq
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MQSFRERSGGYHSNQPCYQQESHELSRLETYRQHPHHPHPQHPLPLPSPGLHPSPGPGHS
RTGYEAHSLANPTSMTPAGGPVTGGGPKDCYSQQAYPVYPGNGGGNESGNGGSAPSQTKK
AYRGSKVPTPDPSQHLQGPGGYSNLMGPGSYSAQYLSEGHLQQKWEDSAQLAQYDQEMVG
RIEAGGTPAPVTSQYIDPTMLGHTQTQCQQPSTPTYTSPHHQAHPPNPAPSPLMYPQSHL
HYPQHSASPSPYIEKCSPMPHCYKGYSIPSNSQYGRQMSSHSSLKPVGYRSTQNSYGYQQ
PPSRVYEQQPPLQAMANPQESHPKYQHYSQPQQNYCLSELSVRSPEQYYQTCSPSSSHSP
ARSVGRSPSYSSTPSPLMTNPESFQYGQPPMTPGAASSSSSSSAGMQEQASTNTMLMPPR
PHPSPNVTHAAPHSYATTAQVPTMKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLL
SEALVANKKGVKRSSGGSINSAGSGASIKKGEEYKCPPYPDSGGSIGGGPMQDPYSTPQH
QPLPMELHEGGYSSSSDEQLERGYYYCGQGRSPAQAPNNTQLSLDTASSCSMTSPDDMST
RSGDSGLHNLTPDPTRCQSGQGGDGMNTPVKSIGDERSPTSITIPSPMKQERDSPLDIQH
INEPVKENFEESAWTEKSADKEEVSTEISPDSERDSDTTKSTENLEKWSDEEKCPALYSK
VSKGMTEKRYCYKETLYQTVQSKYDPDTRDSVEQSPAALSDSSQREHFGHEMKTEAFKSE
SPTASESSVKTLPFISRGDLEQDQYSTEKEDSSEDTSPTPQVEAVDECNSVKREIRDEED
EEEGEEDESAQDEADEEGEGEIQKQQHYLSSPLSVGVREELEEGENVSSTEDHINRDAQE
KSSGDLCSRTEGQSTELHADNEPAAHPNAAAAADASAWESAIGDTAPQPQSAMPVFSALN
DKTTPPAQARDHIDHSDAKVLEPDSPQLPGKSILPSAPSWADTPPSPQKGDEDMEPGISC
ASAVTPMAKTEPVAPSAQLRAFGRKHARGRRRIMHSGVGIRRHLILERDGEQEEEGAPSL
TQKLCMPASKTLFFSDPLDIHHKSIVSQTPKMLTDGFRSRMCTRSFNAPDLPPKVEPHVK
RKPGPKPGSKPGLKPGPKLGPKMGAKPGPKPGPKPGLKPGPKPGPKPIPKPGLKPVPNEL
EMPEKIETPVKRKPGPKPGSKTGPKSGSKPGPKPGPKPALKPGPKPGPKHADVLLPDDAA
PIKSSVGRPKGSVSKAKLVQEEETIQPLTGLPCPARKSPKAFIVQVTQDAQLVNQDEKQA
NHEVTAQEKEGKNMVLRSRKPSQEKLSKEKVTGEDVFPQTLTGDSPKVEESIKVEQTPTS
ILNAVKNPDVPADPPAPLATPFLTEQSEVKILLPLKRKPSPEMSTTPAKKKRGPKPKPKH
SPQPSLVEQVVSTLKEKGVRGPKRKRGPLKKVSVVTPPPKDTPPNTSETDFTNGVPVVPP
QCPTKTKVLPPRKGRGQKYEAMVQKITSPSSKKHLPIPQMDSNLSDDATARALPTLVLKE
GEPSMLINSIEVIGGKVKCIDSRQEVLKQRETAVRKKEMAQGRYSSTAAEVRQGMEEGIV
NKEETRQEYIKPGIPHGVRADKGWSSMEASVEASSLGEWTQQASKVVSTAPSKATRTKRT
RWAMVESTDASIVALEAGSLIVTTPRLAKQRAIKNNHEMHLKQKRKKRKGQAPLEETETV
EEKNVESVEQQVRVGETVNPAESSIPLPMSADDITEAPQVTSREVIQKPKRGRKPSTNPT
QRKRGKMSAEQIPGKPMKIHKKPGPKPGMKDAMEVIEAVVRAAGCERDEKEERENEEMER
RETEEEDKVETRIVGPVVTISEKQTEIISVKRIRRKPVHQSSKLSFCPYVRINNSRDFSS
WCAIVNKPEDAVVFQRRRKKGILRMRNPITVAKIVPHTAAMLQGPLVKIHLIDRCLTCCL
CGKPANYRDLGDLCGPYYTLDGVPRKMLTMEHTESVREETQKPNSSRSEEPSTSKSEGEG
STEKESDAEAFTQEGSSSRHHWRYRRAERTERTGHESGPRRLTLRERFRRMKQLQAISTG
ASSGQAGGDSMFNRLQVEAEAKEHWAHENCAIWTKGIMMVAGRLYGLREAARNSAQTAAH
STRMISP
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgtgagcgcagcggtggttaccacagcaaccaaccctgctaccagcag
gagtcccatgaattatcccgcctggagacctaccgacaacacccgcatcatccccacccc
cagcacccgctccccctcccaagccccggtctacatccaagcccaggccccgggcacagc
agaacaggctatgaggctcattcactggcaaaccccacgagcatgactccagctggagga
ccggtaactggaggaggacccaaggactgttacagccagcaagcataccctgtttacccg
ggcaatggtggagggaatgagagtggaaatgggggctcagcaccttcgcagacaaagaaa
gcctacagaggaagcaaagtgcccacaccagaccccagtcagcacctgcagggtcctggg
ggctatagtaacctcatgggccctgggagctactcagcccagtatttaagtgagggccac
ctccagcaaaaatgggaggactctgcccagttagcacagtacgaccaggagatggtgggg
cgtatagaggctggtggtacccctgcacctgtcacctcccagtacatagacccaaccatg
ctgggccacacccagacccagtgccaacagccctccacccctacatataccagtccccac
catcaagcccacccccctaaccctgccccttcccctctcatgtacccccagagtcacctt
cactacccccagcactcagcctctccgtcgccatacatagagaagtgcagcccaatgccc
cactgttataaaggttacagcattccctcaaattcccagtatggcagacaaatgagcagc
cacagcagtctgaagccggtgggttacaggtcgacccagaacagttatggctaccagcag
cctccctccagagtttatgagcagcagccccctttacaggccatggccaacccccaggag
tcccaccctaaataccaacactacagccaaccccaacaaaactactgcctgtcagagctg
tctgtccgatcaccagaacagtattatcagacgtgtagcccctcctcaagccactctcca
gcacgctctgttggacgctccccctcgtacagctccaccccttcaccactaatgaccaat
ccagagtcattccagtatggtcaacctcctatgacccctggggcagcatcctcctcttca
tcctcttcagctggcatgcaagagcaagccagcaccaataccatgttgatgccccctcgc
ccacacccctcccccaatgtgacccatgcagccccccacagctacgccacgacagcgcag
gtccccaccatgaaggaacgcttctcggagaagctgttgtcaaaccccagcttgtggagt
ctgaatgccctcacctctcaggtagagaacatctctaataatgtccagcagttgctgcta
tcagaggccctggtggccaacaagaaaggtgtgaagcgcagcagtggagggagcatcaac
agtgctgggagcggagcatctatcaagaagggtgaggagtacaaatgtcctccatatcca
gatagtggtggtagtattggtggaggcccaatgcaggacccttactctaccccacagcac
cagccattgcccatggaactccatgagggaggctactccagcagtagtgatgaacaactg
gagaggggttactactactgtggccagggcagaagtccagcacaggctcccaataacaca
caactcagcctggacacagcctcttcatgctccatgacatctccagatgatatgtccacc
aggtctggagactcaggactgcacaaccttacccctgatcccactcgatgtcagtcaggg
cagggaggagatggcatgaatactccagtaaagagcattggcgatgagaggtctcctacc
agcattacaatccccagtccaatgaaacaagaacgggactcccctttagatatacagcat
atcaacgagcctgtcaaagagaactttgaagaatcggcctggacagaaaaatcggctgac
aaagaggaggtgtcaacagagatatctccagacagcgaaagagattcagacacaacgaaa
tctacagaaaatctggagaaatggtcagatgaagagaaatgtccagctctctacagcaaa
gtaagcaaaggaatgacagaaaaaagatattgctacaaggagacgttgtaccaaacggtc
cagagcaaatatgaccctgatacaagagactcagtagaacagtccccagcagctctctct
gactccagccaaagggaacactttggccatgagatgaaaacagaagcgttcaaatctgag
tctccaactgcatctgagagctcagtgaaaacattgcctttcatatctagaggtgacctt
gaacaggatcaatattccacagagaaggaggacagctccgaggacacctctccaaccccc
caagttgaggccgtggatgagtgcaactcggtcaagagagagatcagagatgaggaagat
gaagaggagggggaggaggatgagagtgcacaggatgaggcagacgaagagggagaagga
gaaatacagaaacaacaacattatctgtcctctcctttgtctgtaggggttagggaggaa
ctggaggagggggagaacgtgtcatcgactgaggatcacattaacagagatgcgcaagag
aagtcatctggggatctctgcagcaggacagaaggtcagagtacagagctccatgctgac
aacgagcctgcagcccatcccaatgcagcagcagcagcagatgcttctgcatgggagtca
gccattggggacactgctcctcagcctcagtctgctatgccagtcttctcagcgctcaat
gacaagacaacacctccagctcaggccagggatcatattgatcacagtgatgctaaagtg
ctggagcccgactctcctcagctgccagggaagtcgatacttccctcagccccctcctgg
gcagacactcctccttccccccaaaaaggggatgaagacatggagccgggcatcagctgc
gccagtgcagtgactcctatggccaagacagaacctgtggccccatctgctcagctgagg
gcatttggacgtaagcatgcaaggggtagaagaagaatcatgcattcaggtgtgggaatc
aggcgacatctaatcttagagagggatggagaacaggaagaggaaggagctccctcgctt
acacagaaactctgcatgcctgcaagcaaaactctgtttttctcggatccattggacatc
catcacaaatctattgtaagccagactcccaaaatgctaacagatggtttccggtcaaga
atgtgcactcgctcattcaatgcaccagatttgccacccaaagttgagcctcatgtgaag
agaaaaccaggccccaaaccaggttcaaagcctgggctcaaaccagggccaaaactaggg
ccaaaaatgggagcaaagccaggtcctaaacctgggcctaaacctggtcttaagcctgga
ccaaagcccgggccaaaacctatacctaaaccaggacttaaacctgtgccgaatgaatta
gagatgccagagaaaattgaaacacctgtaaaacgaaaaccaggacccaaaccaggctca
aaaactgggccaaaatctggatcaaaacctggaccaaaacctggtccaaaaccagctcta
aagccaggtccaaaacctgggcccaagcatgcagatgtgttgcttcccgatgacgctgca
cccatcaagtcctcagtgggtcgccctaaaggctcggtttctaaggcaaagctggtacaa
gaagaagaaaccattcaacctttgacaggactgccctgcccggccaggaagagcccaaaa
gctttcatagtacaagtaacccaggatgctcaactagtaaaccaggatgaaaaacaagca
aaccatgaggttacggctcaagagaaggagggtaagaacatggtcttaagatctagaaag
ccctcacaagaaaaactgtcaaaagaaaaagtcacaggggaagacgtttttccccagaca
ctaactggtgattctccaaaagtcgaggaatctattaaagtggaacaaactccaacttcc
attctgaatgcagtcaaaaacccagatgttccagcagacccacctgcaccacttgccaca
ccattcctgacagaacaatctgaagtaaagatattacttccattaaaacggaaacctagt
ccagaaatgtctacaacaccagcaaagaaaaagaggggtccaaagcccaaaccaaaacac
tcacctcaaccatctctcgtggaacaggttgtctctacactgaaagagaagggtgtccgt
ggccccaaaagaaagcgagggccactcaagaaagtctctgtggtcactcccccacccaaa
gacactcctccgaacaccagtgagacggacttcactaatggtgtgcctgtggtgcctcct
caatgccccacaaaaacaaaagttctcccaccacgcaaaggcagagggcagaaatacgag
gccatggtgcagaaaattacatcaccaagctcaaagaaacacctcccaattccccagatg
gacagcaatctaagtgatgatgcgacagctagggctttgcctacacttgttctaaaggaa
ggtgagccatctatgctcataaatagcattgaggtgatagggggaaaagtgaaatgcatc
gattctagacaggaagtactgaaacaacgggaaacagccgtgagaaaaaaggagatggca
caaggaagatattcttcaacagccgcggaggtgagacaagggatggaagaagggattgtg
aataaggaggagaccagacaagaatacattaaaccaggaataccgcatggtgtcagagct
gacaaagggtggagctcaatggaagcttcagttgaagccagctctctcggagagtggaca
caacaggcctcaaaagttgtatcaaccgctcccagtaaggccaccagaactaaaaggacg
agatgggccatggtggagagcacagatgcctcaatagtagccttggaagcagggagccta
atagttacaacaccaaggctagccaagcagagggccattaaaaacaaccatgagatgcat
ctaaaacagaagagaaagaaaagaaagggacaagcccctctcgaagaaacagagaccgtt
gaggagaaaaacgttgaatcagtagaacaacaggtgagggtcggcgagacggtaaacccc
gcagagtcctcaatacctctgccgatgagcgcagatgacatcacagaagccccccaggta
accagcagagaagtcattcagaaacctaagagaggcagaaaaccatccacaaatccaact
cagaggaaaagaggcaaaatgtcagcagagcagattcctggtaagccaatgaagatccac
aaaaagcctgggccaaaaccggggatgaaagacgccatggaggttattgaagcagtagta
agggctgcaggatgtgaacgggacgaaaaagaggagagagaaaacgaagaaatggaaaga
agggaaacagaggaggaggacaaagtagaaacacgtatcgtgggtcctgtagtgacaata
tcagaaaagcagactgagatcatttctgtgaaaagaatcaggcgcaaaccagtccatcaa
agttctaaactgtctttctgtccttatgtacggattaacaactccagagacttttcttct
tggtgtgccatagtcaacaagcctgaggacgccgtggtttttcagagacgtcgaaaaaag
ggcatactcagaatgaggaatcctatcacagttgcaaaaatagtgccacacactgctgcc
atgctacaaggacccttggtgaaaatacatctcattgacaggtgtcttacatgttgcctg
tgtggaaagccagctaattacagagacctcggtgatttgtgtggaccctactacacactg
gatggcgttccacggaaaatgttgacgatggagcacacggaatccgtcagggaagagaca
cagaaacccaacagtagcagaagtgaagaaccaagcacctcaaagagcgagggtgagggc
agcacagaaaaggagagcgacgcagaggctttcactcaagagggcagcagtagcaggcac
cattggcgctaccggcgggcagaaagaacagagaggacgggtcatgagagcggtcctcga
agattaactctccgagagaggttcaggaggatgaagcagctccaggccatcagcacggga
gcctcaagtggccaagcgggtggtgacagcatgttcaacaggctacaagtggaggcagag
gctaaagagcactgggcccatgaaaactgtgccatctggaccaagggaataatgatggta
gctgggaggctatacggactgagggaggccgccagaaactcagcacaaacggctgcacat
tccacgaggatgatttctccataa
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