Pseudoliparis swirei (Mariana hadal snailfish): 130189239
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Entry
130189239 CDS
T09868
Symbol
cldnk
Name
(RefSeq) claudin k
KO
K06087
claudin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03272
Virion - Hepatitis viruses
pswi04382
Cornified envelope formation
pswi04514
Cell adhesion molecule (CAM) interaction
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
130189239 (cldnk)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130189239 (cldnk)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130189239 (cldnk)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130189239 (cldnk)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130189239 (cldnk)
04147 Exosome [BR:
pswi04147
]
130189239 (cldnk)
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130189239 (cldnk)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
130189239 (cldnk)
Exosomal proteins of colorectal cancer cells
130189239 (cldnk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
130189239
NCBI-ProteinID:
XP_056263971
LinkDB
All DBs
Position
23:13096030..13098514
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AA seq
215 aa
AA seq
DB search
MATTGMQLMGLIMSLVGWVGGVIVCAIPMWRVTAFIGNNIVTAQIIWEGLWMNCIVQSTG
QIQCKVYDSLLALPSDMQATRSLTVFSILICGLALSLGVLGAKCTKCIGVNSLKARIARI
SGILFAVAGFLYLVPICWTAHSIIRDFYDPHVAAPHKRELGPALYIGWGASSLLLIGGSL
LYAGSGPPGLPGSPTFSSGESSPRRAPASQVKGYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccacgggcatgcagctgatgggcctgatcatgtcccttgtggggtgggtgggt
ggggtgatagtctgtgccatccccatgtggcgggtcactgccttcattggcaacaacata
gtgacggctcagatcatttgggaaggcctgtggatgaattgcattgtgcagagcacgggt
caaatccagtgtaaggtgtatgatagcttgttggctctgcccagtgacatgcaggcaacc
cgaagcctcaccgtgttctccatcctgatctgcggcctagccctgtctctgggggtcctc
ggagccaagtgcactaagtgcatcggtgtaaacagcctcaaggcccgtattgctcgcatc
tctggcatcctctttgccgtcgcagggttcctctaccttgtccccatctgctggactgcc
cactccatcatcagggatttctatgatccacatgtggcggccccacacaagcgtgagctc
ggccctgccctgtacatcggctggggggcttcatccttgctcctcattgggggatctctg
ctctatgccgggtcagggccccctggcctcccaggctctcccaccttcagcagtggagaa
agtagtcctcgcagggcaccggcctctcaagtcaaaggttacgtttga
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