Pseudoliparis swirei (Mariana hadal snailfish): 130189245
Help
Entry
130189245 CDS
T09868
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130189245 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130189245 (cpsf4)
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130189245 (cpsf4)
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
130189245 (cpsf4)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130189245 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf_CCCH_4
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_12
zf-CCCH_RBM22
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
130189245
NCBI-ProteinID:
XP_056263982
LinkDB
All DBs
Position
23:complement(17714935..17718881)
Genome browser
AA seq
264 aa
AA seq
DB search
MQDMLANVDHLKFDLELAMQQQLGAQSLPFPGMDKSGSAVCEFFMRAACQKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICMNYLVGFCAEGKSCKFMHPRFELPMGASEQPP
LQQQMQNQTKPLPMLGRSSLSLIQLTNSSMRPQNHMHMAPPQQNNMSGNRGPRPLDQVTC
YKCGEKGHYANKCTKGHLAFLSGQ
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacatgctggccaacgtggaccacctcaagtttgacttggagctggcgatgcag
cagcagctcggggcgcagtcgctgcccttccccggcatggacaagtccgggtcggctgtg
tgcgagttcttcatgagagcagcgtgtcagaaaggtgggatgtgtccgttccgtcacatc
agtggagagaagacggtggtgtgtaagcactggctcagaggtctgtgtaagaagggagac
cagtgcgagttcctccacgaatacgacatgaccaagatgcctgaatgctacttctactcc
aagtttggtgagtgcagcaacaaggaatgtccgttcctgcacattgatccagagtccaag
atcaaagactgtccctggtatgaccgaggcttctgcaaacacggtcctgactgcagacac
agacacacaaggagggtgatctgtatgaactacctggtgggcttctgtgcagaaggaaaa
tcctgtaaattcatgcaccctcgttttgaattgcctatgggagcttctgaacagcctcct
ctacaacagcaaatgcagaaccagacgaagcctcttccgatgctcggtcgctcgtcgctc
tctcttatccagctgaccaactccagtatgcggccgcagaaccacatgcatatggctcct
cctcagcagaacaacatgtctggcaacagagggcctcggccactggaccaggtcacctgt
tacaagtgtggtgagaagggccactatgccaacaaatgcactaaaggccatctcgccttc
ttgagtggacaataa
DBGET
integrated database retrieval system
