Pseudoliparis swirei (Mariana hadal snailfish): 130189272
Help
Entry
130189272 CDS
T09868
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00270
Cysteine and methionine metabolism
pswi01100
Metabolic pathways
Module
pswi_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
130189272 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130189272 (dnmt1)
03032 DNA replication proteins [BR:
pswi03032
]
130189272 (dnmt1)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130189272 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pswi02048
]
130189272 (dnmt1)
Enzymes [BR:
pswi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
130189272 (dnmt1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
130189272 (dnmt1)
DNA replication proteins [BR:
pswi03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
130189272 (dnmt1)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130189272 (dnmt1)
Prokaryotic defense system [BR:
pswi02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
130189272 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
DMAP_binding
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
130189272
NCBI-ProteinID:
XP_056264025
LinkDB
All DBs
Position
23:6822717..6844749
Genome browser
AA seq
1508 aa
AA seq
DB search
MPSKTSPSLPEDVRKRLQVLDEDGISDEDHVKEKLKLVQDFLHVEAQDQLTSLEGKMKSS
EISMEVYISKVKALLGKELCLENGSHDDSVEQNGKTNGSHKDKVNEDVTMGVQEEEEAVK
SPTASKGKGGRKSKTNSDTKKSPASSRVTRNAGKQPSIMSMFSKVQKRLSENLNGDAANG
EDEVKNEKDDVEESREEKRLKVESDENVAPEKSEREITKPVSAAKTPPPKCTDCKQYLDD
SDLKFFQGDPDNALDEPEMLTDERLSLFDSNEDGFESYEDLPQHKITNFSVYDKRGHLCP
FDSGLIEKNVELYFSCVVKPIYDDNPCLDGGVPAKKLGPINAWWITGFDGGERALIGFTT
AFADYILMHSSEEYAPIFAVMQEKIYMSKIVVEFLQKNPDVSYEDLLNKIETTVPPAGLN
FNCFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGVTLGKSMLLYWR
AARRQAIRHPTKIEKDKGPTKATTTTLVYQIFDTFFSDQIEQTDKDCAGAKRQRCGVCEV
CQSPDCGKCPTCKNMIKFGGDGKSKQACKQRRCPNLAVKEAEDDEIVVEEDVPVEKVKKV
SHAKRKKQAQCKLSWIGESVKTEGKKQYYKKVCVNDEVLELGDCVSVSSEDPTLPLYLAR
ISSLWEDNNGKMFHAHWFNRGTQTVLGESSDPLELVMVDECEDMLLNYVQGKVNVMYKAP
ADDWFMAGGMDLEIKVIEDDGKSFFYQFWYDTDYARFETPPKTTSSEDCKFTFCCSCVRT
KEKEERERPCALEPLKDKDHDSKALYALACFKGEQFKVGDSVYLPPDCFQFSVKPVRPAS
PVKRSHRKEDVDEDLYPEYYRKSSDYIKGSNQDAPEPFRIGRIKEIFCHKRSNGKPDSSE
VKLRLYKFYRPENTHKGVKASYHTDINQLYWSEEEVTVSMTELLGRCQVEYAEDLNESVQ
DYSSGGPDRFYFLEAYNAKSKSFEDPPNHARSLVRKGKGKGKGKGKGKATAAQEPQDSQN
DPQTLKVPKYRTLDVFSGCGGLSEGFHQAGMTETLWAIEMWEPAAQAFRLNNPRTTVFTE
DCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVV
SYLSYCDYYRPKFFLLENVRNFVSFKSSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQT
RRRAIILAAAPGEKLPRYPEPLHVFAPRACSLNVVVDERRYVSNVTRGNGGIYRTITVRD
TMSDLPEIRNGAAGLEISYNGEPQSWFQRQIRGTQYQPILRDHICKDMSALVEGRMRHIP
LAPGSDWRDLPNLEVRLKDGTMTKKLRFSHPDKKNGRSSTDALRGVCTCSGGTPCDPADR
QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSV
RECARSQGFPDTYRFFGNTLDKHRQIGNAVPPPLSRAIGMELKKCVMNRMKEEQASETVK
QEKMEVSD
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaagacttccccgtctctgccagaggatgtcaggaaaaggctgcaggtgctg
gatgaggatggcatttcagacgaggatcatgtgaaagagaagctcaagttggtgcaggac
ttcctgcatgttgaggctcaggaccagctgaccagtctggagggaaaaatgaaaagttca
gagatctcaatggaggtctacatctccaaagttaaggccttgctgggaaaagagctttgt
cttgaaaatggctcgcatgatgacagtgtggagcagaatggaaagacgaacggttctcac
aaagataaagtaaatgaagatgtaaccatgggcgtacaggaggaagaggaggctgtcaag
tctccaacggcttccaaagggaagggtggacgcaagagcaaaacaaattctgacactaaa
aagtctccagccagtagcagggtgacaagaaatgctggaaaacagccatccatcatgtca
atgttctctaaagttcaaaagcgattgtctgaaaacttgaatggagatgctgctaatggg
gaagatgaagtaaagaatgagaaagatgatgttgaggagtctcgggaggaaaaacgtctt
aaagtggaatccgatgaaaatgttgcaccagagaaatcggagcgtgagattactaaaccg
gtttctgctgcaaagacgccacctcccaaatgtacagactgcaaacaatacttggatgac
tctgatctcaagttctttcaaggagatcctgataatgcgctggatgaaccggagatgtta
acagacgagcgtctctccctgtttgactccaatgaggatggatttgagagctacgaggat
ctgccacagcacaagattacaaacttcagtgtgtatgacaagaggggccatctttgtcca
tttgactctggactgattgagaagaacgtggagctctacttcagctgtgttgtcaaaccc
atctacgatgacaacccgtgcttggatggtggtgttcctgccaagaagcttggacccatc
aatgcttggtggatcactggttttgatggtggagaaagggccttaattggtttcactaca
gcgtttgctgattacatcctgatgcactcgagtgaggagtacgctcccatttttgctgtg
atgcaagagaagatctacatgagcaagatcgtggtggaattcctccagaagaatcctgat
gtttcttatgaggaccttctaaacaagattgagacaaccgtccctcctgcagggctgaac
ttcaactgcttcacggaggacacgctgctgcgccacgcccagtttgtggtggagcaggtg
gagagctacgatgaggccggcgactccgatgagcagcccatcattgttactccctgcatg
agagacctcatcaagctagcaggagtcactctcgggaaaagcatgctgctgtactggaga
gctgccagaagacaggccattcggcacccaacgaagatcgagaaggacaaggggccgact
aaagcgaccacgaccacgctggtgtaccagatctttgataccttcttctctgatcagata
gagcagactgataaagactgtgccggggccaaaagacagcgctgtggtgtctgtgaggtt
tgccagtctcctgattgtggcaagtgtcccacttgcaagaacatgatcaaatttggaggt
gatggaaaaagcaagcaggcttgtaagcagaggagatgtccaaacctcgcagtaaaggag
gctgaagacgatgagatcgttgtagaggaagatgttccagtggagaaggtgaagaaggtt
tctcatgctaagaggaagaagcaggcccagtgtaaactgtcttggatcggagagtctgtg
aagactgaggggaagaagcagtactacaagaaggtctgtgtgaatgacgaggtgttggag
ttgggcgactgcgtctcggtctcatcagaggatccaacattacctctgtatctggcaaga
atctcatctctgtgggaggacaacaatgggaagatgtttcatgcccactggttcaatcgc
ggaactcaaacggtgctgggagagtcttctgaccccctggagctcgtcatggtggatgag
tgcgaagacatgctgctcaattacgtgcagggcaaagttaacgtcatgtacaaggccccg
gctgacgactggttcatggcgggtggcatggatttggagatcaaggtgattgaggatgac
gggaaaagtttcttctatcagttctggtacgacacggactatgcccgctttgagactcct
cccaagaccacgtcatcagaagactgcaagttcacgttctgttgcagctgcgttaggaca
aaagagaaggaggaacgagaaaggccttgtgcattggaacccctaaaggacaaggaccat
gactccaaggctctgtatgctctggcctgcttcaaaggggagcagtttaaagtgggagac
agtgtctacctgcctcctgactgttttcagttcagtgtgaagccggtgaggcccgcgagt
ccagtgaagcgctctcataggaaggaggatgtggacgaggacttgtatccagaatactac
aggaagtcctccgactacatcaaggggtccaaccaagatgctccggagcccttccgcatc
gggcgcatcaaagagatcttctgtcacaagcggagcaacgggaaacccgacagctcggag
gtcaaactgcgactctacaagttctacaggccggagaacactcacaaaggtgtcaaagcc
agttaccacacagacatcaatcagctgtactggagcgaggaagaggtgacagtcagcatg
accgagttgctcggccgctgccaagtcgaatacgcagaagacctgaatgaatcggtccag
gactattccagtggcggaccagaccgcttctatttcctggaggcctataatgcaaagtca
aagagctttgaagatcctccgaatcatgctcgctctttagttcgcaaaggaaagggcaaa
ggaaaaggtaaaggcaaaggaaaggctaccgctgcacaggaaccacaggactctcagaat
gatccgcagactctgaaagtgcccaaatatcgcacgctggatgtgttttctggctgcggt
ggactctccgaaggcttccaccaggctggtatgaccgagactctgtgggccatcgagatg
tgggagccggcagcacaggccttcaggctcaacaaccccagaaccaccgtgttcaccgag
gactgcaacgttctgctcaagctggtcatgtcgggagagaagacgaactctctcggccag
aagcttcctcagaagggcgacgtggagatgctgtgtggaggaccgccctgccaaggcttc
agtgggatgaaccgcttcaactctcgcacctactccaaattcaagaactcgctcgtcgtc
tcttatctcagttactgtgactactacagacccaagttcttcctgctggagaacgtgagg
aacttcgtctcgttcaaaagctcgatggtcctgaagctgactctacgctgtctggtgcgc
atgggctaccagtgtacctttggtgtccttcaggccggtcagtacggtgtggcccagacc
cgccgcagggccatcatcctggctgctgctcctggagagaagctgcctcgctaccctgag
ccgctgcacgtgtttgctcccagagcttgttctctgaacgtggtggtggacgaaaggaga
tacgtcagtaatgtcacacgaggtaacggaggaatctacagaaccatcactgtcagagac
accatgtcggatctgccggagatccgtaatggcgcggccgggctggagatctcctacaac
ggggaacctcagtcgtggttccagaggcagatcagaggaacccagtaccagcccatcctc
agggatcatatctgcaaggacatgagtgctctggttgaaggtcgcatgcgtcacatccct
ttggctcccggctccgactggagggacctgcccaacctcgaggttcggctgaaagacggc
accatgaccaagaaactgcgcttctcgcaccccgataagaagaacggccgcagcagcacc
gatgctctccgaggggtttgcacttgttcaggagggactccgtgcgaccctgcagaccgg
cagtttaacaccctgatcccctggtgtctgccgcacactgggaaccgccacaatcactgg
gccggcctctacggcaggctggagtgggacggcttcttcagcacaacggtcaccaaccct
gagcccatgggcaagcagggtcgagttctgcatccggagcagcaccgagtggtcagtgtg
agggagtgtgcgcgctctcagggattccccgacacgtaccgcttctttggaaacaccttg
gacaaacacagacagattggaaatgcagtgccccccccgctctccagagccatcggcatg
gagctgaagaagtgcgtcatgaacagaatgaaggaagaacaagcatcagagactgtcaaa
caagagaagatggaggtctccgactag
DBGET
integrated database retrieval system
