Pseudoliparis swirei (Mariana hadal snailfish): 130189354
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Entry
130189354 CDS
T09868
Symbol
ush1ga
Name
(RefSeq) pre-mRNA splicing regulator USH1G isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130189354 (ush1ga)
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
USH complex and associated proteins
130189354 (ush1ga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
Motif
Other DBs
NCBI-GeneID:
130189354
NCBI-ProteinID:
XP_056264124
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Position
23:complement(12486841..12493287)
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AA seq
472 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIAARGGNPDK
CDIWGNTPLHLAAANGHLNCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDTI
ATKQTGLNTKLVGKMKDRAFRDAERRIKECVKMQKKHHDRMERRFHKETSEASASDVMSF
SSYNSSSISHKLHNSNATTVNVPYSQATLHATNRGKTKIQRKLDKRKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYVNPKERGHRNVRDMFTRENYDAISRAISEPDLHGPDV
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFDIGGRDEDSADRSGNNVRLRSRLHH
YPSADEDSIGSARSLQQRNAEELPWEEVELGLDDDDEADTSPLEVFLATQSMSDFFSILK
REKIDLEALLLCSDHDLKSIHVPLGPRKKILDACKRRLETIEDSDCIVDSEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtaccacaaggcggcccgggatggctacctggacctgctgaaggaggcg
actcggaaggacctcaacgcgccggatgaggatggcatgacaccgacgttgtgggccgct
tatcacggcaacctggaggctctgcggctgatcgcggcgaggggaggaaaccctgacaag
tgcgacatatgggggaacacgccgctccacctggcagctgccaacggtcacctcaactgc
cttttcttcttggtgtctttcggtgccaacatttggtgcctggacaacgactaccacacg
ccattggacatggccgccacaaagaatcacatggactgcgtccgctacctggataccatc
gccaccaagcagacaggcctcaacaccaagctggtcggcaagatgaaggaccgggcgttt
cgcgatgccgagcggcggatcaaggagtgtgtgaagatgcagaagaaacaccacgatcgc
atggagcggagatttcacaaggagacgtctgaggcctctgcgtcagacgtcatgagcttt
tccagttacaacagcagctctattagccacaagctgcataactcaaatgcaaccacagtc
aatgtgccatattctcaggctactcttcatgccacaaaccgagggaagacaaagattcag
aggaagctggataagaggaagcaaggagatgggacatttaaaatctacgaggacgggagg
aagagtgtgcgctccctctccggacttcagctgggcaacgatgtcatgtttgtcaaacag
ggaacttacgtcaacccaaaggaacgtggccatcgcaatgtccgtgacatgtttaccaga
gaaaattacgatgccatttcacgtgccattagtgagccggacctccacggtcccgatgtg
gactactctgagatcagcacggactcgggacacgactccctgttcaataggcccggtctg
ggcaccatggtctttcggaggaactatgtgagtggggggatgtttgacatcggtggtcgg
gatgaggacagtgcagaccggtcaggcaataatgtgcgtttgcgcagtcggctgcatcat
tacccgagtgcagatgaagacagcatcggcagtgcacgcagccttcaacagaggaatgcg
gaggagctgccctgggaagaagtcgaattggggctggacgatgacgatgaggctgacacg
agccctctggaggtcttccttgccacacagagtatgagtgacttcttctccattttaaag
agggagaagattgaccttgaagcactgttgctgtgctccgatcatgaccttaagagtatc
cacgtccccttaggaccaaggaaaaagatcttagatgcctgcaagagacgtctggagacc
atagaagactcagactgcatcgtggactcagagctataa
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