Pseudoliparis swirei (Mariana hadal snailfish): 130189367
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Entry
130189367 CDS
T09868
Symbol
caskin1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130189367 (caskin1)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
130189367 (caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_5
Ank_4
Caskin1-CID
SAM_2
Ank_3
Caskin-tail
Caskin-Pro-rich
SH3_2
SH3_1
SH3_9
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
130189367
NCBI-ProteinID:
XP_056264142
LinkDB
All DBs
Position
23:20016750..20121184
Genome browser
AA seq
1617 aa
AA seq
DB search
MGKDQELLQAVKTEDLLTVQKLLQRPRPGKAKLLGSAKKVNVNFQDTDGFSPLHHASLNG
NLELITLLLESQAAVDIRDQKGMRPLHYAAWQGKAEPMKMLLKAGSSVNGQSDEGQIPLH
LAAQHGHYDVSEMLLQHQSNPCLVDNAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPK
KGDTTDPNGTSPLHLAAKNGHIDIIRLLIQAGIDINRQTKAGTALHEAALCGKTEAVRLL
LESGINAAVRNTYSQTALDIVYQFTATQASREIKQLLRDASAALQVRALKDYCNNYDLTS
LNIKAGDVITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSTMVEVISKRTGLASTVICTQQ
FQKIPLVPPATVAPANAVVNGNDTTFHQIHILPPPPPPPPPHSHQPLLPLFTSFGYSKSP
VTTPLGDTPTAPGCRGSEASPHSSPTTSCGPHGGSNEEIWVLRKPVAAGDRSSMGSSGSV
ASVRSSGSGQSAGSGQHVLHPQAEGVKLLATVLSQSAKAKEHLLEQSKSVDQPAGSASSS
RTSSQSGCPLHEAPPYDVATTRKGEGQGEGKSSEAVVQWLSDFQLQVYAPNFLGAGYDLP
TISRMTPEDLTAIGITKPGHRKKMTSEINKLSVTERLPEQKPANLGEWLSAIGLNQYHQV
LVQNGYENIEFITDITWEDLQEIGIIKLGHQKKLMLAVKRLAELQRSSEGRGSLRKKPPP
ITQQQEVLSLDGPPLDEVMSPKMNTFQDSELSSELQSAMTQPGQEVKVQRTRSKDHDEGM
TGGGGGGGGGGGAGPPKKEARTMRQQSSQGSASSHRGSISSQGKHRHSHSHSQPAPPYTP
PHTPTKTRTSSSSSSSSSVQSSASPQAKHKPCPQFAQGEGPQSPRSHPPQSPTQREPPCT
QQQQQPQVLPHHQAHPQHQPQTQVTAVKENQQPPVPLLRLPPESERAEGEGDESSALQKN
RPHSLSRHAASDGECDERAEGGRGREGGGEAEVVGGDQGSAVARGERVKYATVTHRVSRS
HSVRNQDKTANRNQTMPFPLRQKKKGPPPPPPKRSSSAISTSNSNLTEASAQPHELTTTG
GVLDVPYHQQRRASDLGMSVEAAPVEKSSVGSVRSIAAMLEMSSIGGGAKGIALQKNFLQ
VGKTRDAIGLDGEVVNRRRTISGPVTELVAAARREQPAPSALPSPFVQAQNNPLPDHPSS
PNPPASPHPSSGDSGSSSENLPFADEGSLTIRRQGRGEGEGQCVFCVCLQGDGEDPQGDG
GYRQEDISRVEATATLKRRARSSKPHPNGADFTLQESSTVKRRPKSRDKEPEGYADLAPP
NTTQPVPYQNGTATVKRRPPSDSGVTEQPQPQPQMTAAPRRASTDQGAPVANEGGPVRKP
KPPVSPKPVVAQIKRQAGPQTPPPLVSNKRVPLPGPGTPGSPVEGKKIPPPVSPKPAPPP
TAPKPAKLIHSMTSPSSPSSAAVKQHPAVTRQVSSPPCFPPSHIPGPPNAKSPSPSPQSP
RTPQTPTTPQTPATPSPTPPPVKPPRSSIGGVSVDSGMAGGGVAAPAATTPDFGADSLVH
QKLEETSASLAAALQAVEDKILRQDDSVAEQKTTVSILDDIGSMFDDLADQLDAMLE
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaccaggagctgctgcaggcggtgaagaccgaggacctgctcaccgtgcag
aagctgctgcaaaggccccggccagggaaagcaaagctcctcgggtcggcaaagaaagtg
aatgtcaacttccaggacacagacgggttttctccactgcatcatgcatcgctcaatgga
aacctggagctcatcactctgctgctggagtcacaggctgctgtcgacatcagagaccag
aaaggtatgcggccgctgcactacgcagcctggcaggggaaggcggagcctatgaagatg
ctgcttaaggccggctcgtccgtcaacggccaatcggatgagggacagattcccctccac
ctggcagcacagcacggccactacgacgtgtcggagatgctgctgcagcatcagtccaac
ccgtgcctggtggacaacgcggggaaaacgcctctggacctggcctgcgagttcggccga
gtcggggtggtccagttgttgctgtccagcaacatgtgtgctgccttgctggagcccaag
aaaggagacaccaccgaccccaacgggacgtctccgctccacctggccgccaagaacgga
cacatcgacatcatcaggctgttgatccaggcaggtatcgacatcaaccgacagaccaaa
gcgggcactgccctgcacgaggccgccctgtgtggaaagaccgaggcggtgagactcctg
ctggagagcgggatcaacgccgccgtgagaaacacctacagccagactgcactcgacatc
gtctaccagttcactgcaacgcaagccagcagagagatcaagcaactgctgagggatgcg
tcagcagcccttcaggttcgggctctgaaggactactgcaacaactacgacctgaccagc
ctgaacatcaaagcaggagacgtcattacggttttggagcagcaccccgacggtcgctgg
aaaggctgtatccatgacaaccgaacaggaaatgaccgagtgggctacttcccttccacc
atggtggaagtcatcagcaagcgcacaggtttggccagcacagtcatttgcacccaacag
tttcaaaagataccgctggttcctccggcgacggttgcccctgccaacgcggtagtcaac
ggcaacgacaccacgttccatcagatccatatcctgcctccaccgcctcctcctcctcca
ccacattcccatcagccactgcttccacttttcacttcctttggctatagcaagtcgccc
gtgacaaccccactgggagacacacccactgccccaggttgtcgcggctcagaggcaagt
cctcacagctctcccaccacatcctgcgggccccatggaggctccaacgaagaaatctgg
gtactgcgcaagcccgtggcagctggagaccggagcagtatgggtagttctggcagcgtg
gccagcgtgaggtcgtcgggcagcggtcagagcgccggcagtgggcagcacgtcctccat
ccacaggctgagggcgttaagcttctggccaccgtcttgtcccagtctgccaaagccaag
gagcatctgctggagcagtccaagtctgtggaccagcctgcaggctccgccagctcctct
cggacatccagccaatcgggctgtccactccacgaggcgccgccttacgatgtcgcaacg
accaggaagggggaggggcaaggcgaggggaagagctcagaggccgttgtccaatggctg
agcgactttcagctgcaggtctacgctccgaacttcctgggcgctgggtatgacttgccc
accattagccgaatgaccccggaggatctgacagctattggaataactaaaccaggtcac
agaaagaagatgacctccgagattaacaaactaagtgtcaccgagcggctgcctgaacag
aaacccgccaatctcggagaatggctgtctgctattggtctaaaccagtaccaccaagtg
ttggtgcagaacggttacgagaacatcgagttcatcactgacatcacctgggaggatctg
caggaaataggcatcatcaaactgggccaccagaagaagctgatgctggcggtgaagcgg
ctggccgaactgcagcgcagctcagaggggcggggctccctcaggaagaagcccccgcca
atcacacaacagcaggaagtcctgtcgctggacggtccacctctagacgaggtcatgtct
ccgaagatgaacactttccaggacagtgagttgagctccgagctacagagcgccatgacc
cagccaggccaggaggtcaaagtgcagcgaacacgcagcaaggaccacgatgaggggatg
acaggagggggagggggaggaggaggaggaggaggtgctggcccacctaagaaggaggcg
cggactatgaggcagcagagcagccagggaagcgcctcctcccacagaggcagtatctcc
tctcaaggcaaacaccgccactcccactcccattcgcagcctgcacctccctacacgccc
cctcacactccgaccaagaccagaacctcgtcttcctcctcctccagctcttctgtccag
agctcagcatctccgcaggccaaacataagccgtgtccccagttcgcccagggggagggg
cctcagtcgccgcgctcacacccccctcagtctccgacccaacgcgagccgccgtgcacc
cagcaacagcagcagcctcaagtcctgccgcaccaccaggcgcaccctcagcaccaaccg
cagacgcaggtcacggcggtgaaagagaaccaacaaccgccggtgccgctcctccgcctc
ccaccggagtcggagcgggccgagggagaaggggacgagtcttcggcgctccagaagaac
cggccccacagcctcagccgccacgccgcctcggacggcgagtgcgacgagagggcggaa
ggaggtcggggacgggagggaggaggagaggcggaggtggtgggcggagatcagggctcc
gccgtcgccagaggggagcgagtcaaatatgcgacggtgacccaccgtgtcagccgcagc
cactcggtgcgcaaccaggacaagacggccaaccgcaaccagacgatgccctttcccctg
cgccaaaagaagaagggcccgccgccgccgccgcccaaacgctccagctccgccatctcc
acctcgaactccaacctgacggaggcgagcgcgcagccgcacgaactcaccaccacgggg
ggggtgctggatgtgccttaccaccaacagcgacgggccagcgacctggggatgtccgtg
gaggcggctcctgtggagaagagcagcgtgggtagtgtgaggagcatcgccgccatgttg
gagatgtcttccataggaggcggagccaaaggcatcgcactgcaaaagaatttcctgcag
gtggggaaaacacgcgatgccattggcctggacggtgaggtggtgaaccgacggcggacc
ataagtggcccggtcactgagctggtggcggctgccaggcgcgaacaaccggctccctct
gctttaccctctcccttcgtccaggcccaaaacaaccctctacctgaccatccctcctcc
cccaaccctcccgcctccccccacccgagctcgggagacagtggcagttcttctgaaaac
ctgccattcgctgatgagggaagtctgaccatccgccgccagggtcgaggagaaggagaa
ggacagtgtgtattttgtgtttgtctgcagggtgacggcgaggatccccagggagacggg
ggctacaggcaggaggacatctccagggtcgaggccacggcgaccttgaagcgacgggcc
cgcagctccaagccccaccccaacggcgccgacttcaccctccaggagtcgtccaccgtc
aagcggcggcccaagagtcgcgacaaggagccggagggctacgccgacctggcgccgcca
aacaccacgcaaccggtgccctaccagaacggcacggccacagtgaaacgccgcccgccg
tccgattctggagtgaccgagcagccgcagccgcagccgcaaatgactgctgcaccccgc
agggccagcacggatcaaggcgctccagtggccaatgaaggaggtcccgtgagaaaaccg
aagcctccggtctccccgaagcccgtcgtggcacagataaagagacaggcgggcccacag
actcctccccctttggtctccaacaagagggtccccctgcctggccctgggacgccggga
agcccagtggaaggaaagaagatcccgccccccgtctcgccgaaaccggcgccgccgccc
acagcacccaaaccggccaagctcatccactccatgaccagcccctcctccccgagctct
gccgcggtcaaacagcaccccgcggtgacccgacaggtcagctcgccgccctgcttccct
ccttcccacatccccggcccgccgaacgccaagtcgccgagcccgtctccccagagcccg
cgcacgccgcagacccccaccacgccacagactcccgccacccccagcccgaccccgcca
cccgtcaagcccccacgctcctcgatcggcggggtgtcggttgacagcgggatggcggga
ggcggagtcgcggcgcccgccgctacgactccggattttggcgccgattcattggtgcat
cagaagctggaggagacgagtgcgtcgctggccgcggctctgcaggctgtggaggataag
atactgcggcaggatgactccgtggctgagcagaagaccacggttagcatcctcgacgac
atcggcagcatgtttgatgacctcgccgaccagctggacgccatgttggagtaa
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integrated database retrieval system
