Pseudoliparis swirei (Mariana hadal snailfish): 130189459
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Entry
130189459 CDS
T09868
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130189459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130189459
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130189459
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130189459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-RING_2
zf_RING_Vps8
zf-UDP
WWE_5
PHD_NSD
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
130189459
NCBI-ProteinID:
XP_056264206
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All DBs
Position
24:complement(13475473..13512230)
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AA seq
750 aa
AA seq
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MANSNSMLLASVVVVWEWLNEHGRWRPYSPAVSHQIEAAIRSIDPRGGSVVLGQVDSRLS
PYIIDIQSMHQFRQDTGTIRPVRRSFYDPASAPGQGWQWEWENDVGTWTAYDMEVAIAIE
NAHNRQQPCLDLTPLGFCYLIDFQTMTQVNRQSQRFRRLQRRADMSYPIVSGPLPIPKGG
GVGGGGGLTGALLGVGVSGVSMGIGSSVSTNGGLPTTVLGHPCSCQQCMLVFSVKTNTGG
AGIQTLGRRSLTMQRPKNSVLVSSKPRSPSKSATLGRGQQQNSNSSYYQTLPHGLAISRN
IASPRRNAQLFAQSLAALTAGTSSLGISLSSNRPPPPSLPPPQPPSSKPSPNPPPIPAKH
SLPSASESVPTATLVSPANNVTTPPSPVPSPSPLVMKPQRTPSSAATVCHAPLPQRSSLA
GLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALAGITGILMSAAALPVCLTR
PPKLVLHPPPVSKSDVKPVPGFGHCCKKTTKKQARKGKTPEEVVKKYLQKVKSPPEEDCT
ICMEPLGGPSGYKGPGVGPMSRAESVGRLAQCGHQYHFQCLVAMYNNGNKDGSLQCPTCK
TIYGVKTGNQPAGKMEYHVIPHSLPGHPDCKTIRIIYNIPPGLQGPEHPNPGKPFTARGF
PRHCYLPDSEKGRKVLRLLLIAWDRRLTFSVGTSSTTGESDTVIWNEVHHKTEFGSNLTG
HGFPDPGHLDNVLEELRAQGITEEDGLMEK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggccaacagtaacagcatgctcctggcctccgtcgttgtggtgtgggaatggctgaac
gaacacggtcggtggcggccctacagccccgctgtctcccaccagatagaggcggccata
cggagcatcgaccctcgcggagggagcgtggtcctcggccaggtggacagccggctctcg
ccgtacatcatcgatattcagtccatgcaccagttccgacaagacacgggaaccatccgt
ccggtgcggaggagtttctacgacccagcctcggccccgggtcagggctggcagtgggag
tgggagaacgatgtgggtacgtggacggcctacgacatggaggtggccatcgccatcgag
aacgcccacaaccggcagcagccctgccttgacctgacgcccctcggcttctgctacctc
attgattttcagaccatgacacaggtgaacagacagagccagaggtttcggaggctccag
agacgtgcggacatgtcctaccctatagtgtccggtccccttccaatacccaaaggaggc
ggtgtcggaggaggtggaggcctaacaggagccctgctcggtgttggggtgtcaggggtt
agcatggggattggaagctctgtctccaccaatgggggcttgccgactactgtactgggc
cacccgtgttcctgtcagcagtgcatgctcgtctttagtgtgaagaccaatacaggagga
gcagggatacagactctaggtagacgctcactaaccatgcagcggcccaagaactcagta
ctggtctcctctaaaccgcggagtccgtctaagtccgccactctggggcgaggacagcag
cagaactccaacagcagctactatcagacgctgccacacggtctcgccatctccaggaac
attgcctccccaagaaggaacgcccagctctttgcccagtcactggccgcgctcaccgca
ggcacctcctctctgggtatctccttgtcttccaatcggccgcctccgccgtccctcccg
ccccctcagcctccatcgtccaaaccgagcccgaaccctccgcccattcccgccaagcac
tccttgccttcagccagcgaatcagtgccaaccgccacattggtttcccccgcaaacaac
gtgaccacgcccccctctcccgtgccatctccgtcgccattggtgatgaagccacagcgc
acgccatcgtctgcggccacagtgtgccatgccccgttgccacagagatcaagcttagcc
gggctgagcagaccagcgttacagagaatagcgatggcccagtccagagcgctcatcgcg
tcaggtgtgcccacggtcccagtgaagaacctcaatggatccagtcctgtccaccctgcg
ctggccgggatcacaggtatcctgatgagcgccgcagctctgccagtgtgtctgaccagg
ccgccaaaactcgtgctgcaccctccgccggtcagcaagagcgacgtcaagcccgtgcca
ggctttggccactgttgcaagaagaccaccaagaaacaggctcgcaagggtaaaactcca
gaggaggtggtaaagaagtacctgcagaaagtaaaaagtccaccagaggaggactgtacc
atctgtatggagccactggggggtccatctggatacaagggtccgggggtggggcctatg
tctcgggcggagtcagttggccgactagcacagtgtggacaccagtaccatttccagtgt
ctggtggccatgtacaacaacggcaacaaggacggcagtcttcagtgtcccacctgtaaa
accatctacggcgtgaagacaggcaaccaaccggcagggaagatggagtaccacgtgatc
ccccactctctaccggggcaccccgactgcaaaaccatacgcatcatctacaacataccg
ccgggccttcagggaccagagcatcccaacccaggaaagcccttcaccgcccgaggcttc
ccccgacactgctacctcccggacagcgagaaaggacgcaaggtactgagactgctcctg
atcgcctgggaccgcaggttgaccttctccgtcgggacttcgagcacgactggagagtct
gacaccgtcatctggaacgaggtccaccacaagacagagtttggctccaacctgacgggc
cacggcttccccgaccccggacacctggacaacgtcctggaagagctccgggctcagggc
atcaccgaggaggacggactgatggagaagtga
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