Pseudoliparis swirei (Mariana hadal snailfish): 130189477
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Entry
130189477 CDS
T09868
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00310
Lysine degradation
pswi00514
Other types of O-glycan biosynthesis
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130189477
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130189477
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130189477
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
130189477
Glycosyltransferases [BR:
pswi01003
]
O-Glycan biosynthesis
O-linked Gal type
130189477
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_tranf_2_4
Glyco_transf_25
Anp1
MT-A70
Motif
Other DBs
NCBI-GeneID:
130189477
NCBI-ProteinID:
XP_056264257
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All DBs
Position
24:complement(22887447..22904987)
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AA seq
660 aa
AA seq
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MLQPVQTCPLIQSAPPPCRRCRHNTTARPSASTSSASSSVRRVSSECLSPAMPRVTCLLP
ALLFVLLPGSSRGYFPEERWSPESPLLAPRVVVALVCRNSAHSLPLFLGAVERLNYPKDR
IALWVATDHNIDNTTAILRDWLTKVQNDYHFVQWRPEDEPSAFEDETGPKHWNNLRYEHV
MKLRQAALETAREIWADYLLVADCDNLLTNADTLWKLMSENKTIVAPMLESRAAYSNFWC
GMTSQGYYKRTLAYIPIRKQERRGCFAVPMVHSTYLVDLQKEASRRLAFYPPHPQYRWAL
DDVIVFAYSARMSEAQMYVCNKETYGYFPVPMRSSGTLEDEAESFVHTLLEITVKHPPLE
PSSFLSLPPKQPNKMGFDEVFMINLVRRSDRRERMLRTLYEQELSCKVVAAVDGKALNQT
DIESMRIKMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIADRGLQTSLVIEDDLRFEVF
FKRRLQTLLQELTTHKLDWDLIYIGRKRMQVDHQEKSVPNIHNLVEADYSYWTLGYLLSL
QGAQKLLGAEPLDKLLPVDEFLPVMFDKHPVSEYMDHFESRDLRAFSAEPLLVYPTHYTG
DQGYISDTETSVVWDNETVETDWDRATSRKTQEQGELSFEAQNSDVLQSELENWSARDEL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaccagtccagacatgccctttaattcagtcggctcctccgccatgtcgccgc
tgtcggcacaacacaacagcgagaccctcagcctccacatcctccgcgtcctcctctgtc
cgccgcgtctccagcgagtgtctctcccctgccatgccccgggtcacctgtctgctgccc
gccctgctgttcgtcctcctgccgggctcgagccgggggtatttccccgaggagcgctgg
agccccgagtctccgctcctcgctccccgggttgtcgtcgcgctcgtctgccgcaactcg
gcgcactctctgccgctgttcctcggagccgtcgagcgcctcaactacccgaaggatcgc
attgcgctttgggtggcgacagatcacaatatagacaacaccacggccatcctgagagac
tggcttaccaaggtgcagaatgactatcactttgtgcagtggagacctgaagatgaaccc
agtgcctttgaagacgagacggggcctaagcactggaataatctgcggtatgaacacgta
atgaagctgcgccaggcagcgctggagaccgcccgtgagatctgggccgactacctgctg
gtggccgactgtgacaacctgctcaccaatgcggacacgttgtggaagctgatgagtgag
aacaagaccattgtggcgccgatgctggagtccagagcggcgtactccaacttctggtgc
ggcatgacttcacagggttactacaaacgcacactggcctacattcctatccgtaagcag
gagcggcgtggctgcttcgccgtaccgatggtccactccacctacctggtggacctgcag
aaagaagcctctcgtcggctggctttttatccaccacacccacagtaccgctgggccctg
gatgatgtcatcgtctttgcctactcggctcgcatgtcagaagcgcagatgtatgtgtgc
aacaaagagacttatgggtatttcccagtgccgatgcgttcctccggtacgctggaggat
gaggcggagagcttcgtgcatactctgcttgagatcacggtgaaacaccctccattggag
ccctccagcttcctgtctctccctcccaagcagcctaacaagatgggctttgatgaggtg
tttatgatcaatctggtgcgcagatctgaccgtcgtgagcgtatgctgagaactctgtat
gagcaggagctcagctgtaaggttgttgctgctgtggatggcaaagctctgaaccagacg
gatatagagtcaatgaggattaagatgctgccgggttacaaagacccttatcacggtcgg
cccctcaccaagggtgaactgggttgtttcctctctcattacaacatctggaaggagata
gcagatcgcgggctgcagacctctctggtcatcgaggacgaccttcgcttcgaggtgttc
ttcaagcggcgtctccagacgttgctgcaggagctgacgacgcacaagctggactgggat
ctcatttacattgggcgtaagcggatgcaggtggaccaccaagagaagtccgtaccaaac
atccacaatctggtggaggcggactactcctactggacactcggctacctcctgtctcta
caaggagcccagaagctgctcggggcagaacctctggacaagttgcttcctgtcgatgag
ttcctccccgtcatgttcgacaagcatccagtttccgagtacatggaccactttgagagt
cgggacctgcgtgcgttttctgccgagccgcttctggtgtacccgacccactacaccgga
gaccagggctacatcagcgacacggaaacatcggtggtctgggacaacgagaccgtcgaa
acggactgggaccgagccacgtcgaggaaaactcaggagcagggagagctgagcttcgag
gcccagaactctgacgtactgcagtctgaactggagaactggagcgcgagggacgagctg
tga
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