Pseudoliparis swirei (Mariana hadal snailfish): 130189494
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Entry
130189494 CDS
T09868
Symbol
ctnnd1
Name
(RefSeq) catenin delta-1 isoform X1
KO
K05690
catenin (cadherin-associated protein), delta 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130189494 (ctnnd1)
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_2
HEAT_EZ
Atx10homo_assoc
Cnd1
Motif
Other DBs
NCBI-GeneID:
130189494
NCBI-ProteinID:
XP_056264279
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All DBs
Position
24:complement(27765006..27796150)
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AA seq
1031 aa
AA seq
DB search
MFDVVCQVDDGDGSAGGAGAEEGGGGENLLCGSECVGVVRWQACLLSHYSVPCVDVFAAR
LLDFQLFSVSGVLDYPEGPDCLCLSGSLLDRMERCASSTASLLASVREQERQFEVLSRAL
EEERRSCAGTLPRPLPNTQNGRIPCDADIERLTLNEGYINGTHHFRMDPGQVVQETYTVE
EDPQEAPPVVSVETGEDGTTRRTETTVKKVVKTTTTRTVIPSVSDTLSLDGGGSVTGMGG
GYPPPMLYRQAPGVGVPMDYPTHTVPRNYQYGPPVGYDDYRTGPPSEASYTSLSRGARMD
DRYRPVHQDVYRTLDPSYRAPSRNQLDPYAAQPQVGRMGSAMELSAMTRFIPEPYGLEDD
QRSVGYDEPDYGMGGHPMHYSTMPHNHNAFPHGPPRRTGSYEGTLDGDMSGPGDMYFWGG
APLAQGERGSMASLDSTLRKGPGPSGWRQPELPEVIAMLNYRLDPVRSNAAAFLQHLTYK
NDKVKCDVRRMKGIPALVCMLDNPNKEVHYAACGALKNISYGKDQDNKIAIKNCDGVPAL
VRLLRKTRDQDLTDTITGTLWNLSSHDSVKMEIVDHALHALSDEVMVPHSGWERGSNGAG
GRGEENCKPRHLEWETSLTNTAGCLRNVSSERSEARRKLRECTGLVDSLMYIVQSQIDFK
EVDNKLIENSVCLLRNLSYQVHREIPGCERYQEAAPLNQGPAPSGQKGGCFSSRKSKDEW
FSKGRKDEDAAADIIDIPKRTAPAKGYELLFQPEVVRIYTSLLKESKNPTVLEASAGAVQ
NLCAGRWTYGRYIRALLRQEKGLPMMTELLAHGNDRVVRAMSGALRNMAIDARNRDLLGK
HAVPHLVANLPGGGQSQPVRALSEETVVSVLSTLHEVLGSSLEAAKTLRASQGIERLVLI
NKDGNRSEREVRGAGLVLQTVWGYKELRRTLEKDGWKKTDFMVNLNPPGNNARANGGYED
STLPLIDKGGKGERDMIPMNDMGPDAYSTLDQRVRRNILDNTLEPADKNAVQGGMYGERQ
AALPLMDSYDG
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtggtctgccaggtagatgatggagacgggagtgctggtggtgcaggagca
gaggaggggggcgggggggagaacctgttgtgtgggtctgaatgtgtgggtgtggtaagg
tggcaggcttgcttgttgtctcattattcagtcccttgtgtcgatgtttttgctgctcgc
cttcttgatttccagctcttcagtgtgagcggggtgctggattacccagagggacctgac
tgtctctgcctcagcggatcgctcttggaccgaatggagcggtgcgcgtcgagcacggcc
tccctgctggcctcggtgcgggagcaggagaggcagtttgaggtgctcagccgagctctg
gaggaggagcggaggtcgtgtgccggcaccctgccccgccccctccccaacacgcagaac
ggacgcattccttgtgatgcggacatagagcggctgacgctgaacgagggctacatcaac
ggaacacatcatttcaggatggaccctggtcaggtggtgcaggagacatacacggtggag
gaagatccccaggaggcgccacctgttgtctccgtggagaccggtgaagatgggaccacg
cggcgcactgaaaccacggtaaagaaagtcgtcaagaccaccaccacccgcacggtcatc
ccctctgtgtcggacacactttccctggatggcgggggctcggtgacgggcatggggggg
ggctaccccccacctatgctctacagacaggcgcccggcgtcggcgtgcccatggactac
cccacgcacaccgtgccccgcaactaccagtacggaccgccggtgggttacgacgactac
cgcaccgggcccccgtcggaggcctcctacaccagcctgagcagaggagctcgcatggat
gaccgctacagaccggtccatcaagacgtttacaggactctggatccgagctacagggcc
cccagcaggaaccagctggacccgtatgccgctcagccacaggttgggcgtatgggaagt
gccatggagctgtccgccatgacgaggttcatccccgagccgtacggtctggaggacgac
cagcgcagcgtgggctacgacgagcccgactacggcatggggggacacccgatgcactac
agcaccatgccgcacaaccacaatgcattcccccacgggcccccacgcaggaccgggagc
tacgagggcaccttggatggcgacatgagcggcccgggggacatgtacttttggggaggc
gcgccgctggcccagggggagaggggcagcatggcgtcattggacagcactttaaggaaa
ggccccggccccagtggctggcgtcaaccggagctgcccgaggtcatcgccatgctgaac
tacaggctggacccggtcaggagcaacgccgccgcattcctgcagcatctcacctacaag
aacgataaagtgaagtgtgatgtgcgtcgaatgaaaggcatcccggcgctggtctgtatg
ctcgacaacccgaacaaagaggttcactatgcagcctgcggagccttgaagaacatctcg
tacggcaaagatcaagacaacaagatcgccatcaagaactgcgacggggttcccgctctg
gtccggctgctgaggaagacccgagaccaggacctcacggacaccatcacaggcacgctg
tggaacctttcgtctcacgactccgtgaaaatggagatcgtggaccacgcgctgcacgcc
ctctccgacgaggtgatggtgccccattcgggctgggagcgagggtccaacggggcgggg
ggcagaggagaggagaactgcaagcccaggcatctcgagtgggagacctccctcaccaac
acggccggctgtctacgaaatgtgagttcggagcgaagcgaggcgaggagaaagctgagg
gagtgcacgggattggtcgattctctcatgtacatcgtccaatcccagattgactttaaa
gaagtcgacaataagttgatagagaacagcgtgtgtctgctgaggaacttgtcctatcag
gtgcatcgtgaaatccccggctgcgagcgctaccaggaggccgcgcccctcaaccaaggc
cccgccccctccggccagaagggcggctgcttcagctcccgcaagagcaaagatgagtgg
ttttccaaaggtcgaaaagatgaagatgcagccgcagacataatagacattccaaagagg
accgcgccggctaaaggctatgagctgctgttccagccggaggtggtccgcatctacacc
tccctgctgaaggagtccaagaaccccactgtgctggaggcctcggccggagccgttcag
aacctgtgcgccggacgctggacctacgggcggtacatccgcgccctgctgcgccaggag
aagggtctgcccatgatgaccgagctgctggcccacggcaacgaccgcgtggtgcgcgcc
atgtccggcgccctgcgcaacatggccatcgacgcgcgcaaccgagatctactaggtaaa
cacgcggtgcctcacctggtggccaacctgcccggcggcggtcagagtcagccggtgcga
gcgctgtcggaggagacggtggtgtcggtgctgagcacgctgcacgaggtgctgggctcc
agcctggaggccgccaagaccctcagggcctcgcagggcatcgagaggctggtgctcatc
aacaaggacggtaatcgttctgagcgcgaggtgcgcggcgccggcctggtgctgcagacg
gtgtggggctacaaggagctgcggcgcactctggagaaggacggctggaagaagacggac
ttcatggtcaacttgaacccgccgggcaacaacgccagagccaacggcggctacgaggac
agcaccctgccgctcatcgacaaaggaggcaaaggggaacgggatatgatcccaatgaat
gacatgggaccagatgcctactccacactggaccagagggtgagaaggaacattttggat
aacacactcgaacctgctgacaagaatgcagtacagggagggatgtatggggagaggcag
gccgctttgcctctcatggattcctacgatggttag
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