Pseudoliparis swirei (Mariana hadal snailfish): 130189496
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Entry
130189496 CDS
T09868
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130189496 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130189496 (chrne)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130189496 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
130189496
NCBI-ProteinID:
XP_056264296
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Position
3:complement(9127495..9136912)
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AA seq
518 aa
AA seq
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MMATHGFGIFFGVVTVLGTLMVQVQCNEESKLISDLFSGYNKNIRPVVHPEDTLQIQIKL
TLTNLISLNEKEETLTTNVWIEIQWTDYRLTWNESHYYGIGVIRVPCKTVWLPDIVLENN
IDGKFDVAYYANVLISSNGWMYWLPPAIYRSTCSIEITYFPFDYQNCTLAFRSQTYSANE
VDLILAVGETGETIEWVDIDPEAFTENGEWAIVHRPGRKIINTRYTKDDLEYQEILFNLV
IQRKPLFYVVNIILPCSLVSSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIGQRIP
ETSLSVPLIGKYLIFVMSVTTLIATNQIVVLNISLRSPSTHTMSKTIKHVFLEMVPRFLG
MAPLVDDSEVTTEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQREKHGLTRSIVD
NMDISSTANLYKSLAQAAPEIKQCVDACNFIAESMRQQNTIGSEIECWILIGKMIDKVCF
WAAILLFITGTVWIFLTGHFNRAPEFPFPGQTKKYVPS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaacacacggttttgggatattttttggagtcgtaactgttctcgggactttg
atggttcaggtgcagtgtaatgaggagtccaagctgatcagcgacttgttcagtggctac
aacaagaatatccgcccagtggttcatcctgaagacacgctgcagattcagatcaagctg
accctcactaatctcatctccctgaatgaaaaggaggagacgcttacgactaatgtgtgg
attgagattcaatggactgattatcgcttaacctggaacgaatctcactattatggcatc
ggtgttattcgtgttccgtgcaaaactgtttggctccctgacattgtcctggagaacaac
attgatggcaagtttgatgtggcttactacgccaatgtgttgatcagcagcaacggttgg
atgtactggctgcctcctgctatctatcgcagcacttgttccattgagatcacctacttc
ccatttgattatcaaaactgcacgctagcattcagatcccagacgtacagcgccaatgaa
gtggacctcatcttggctgtcggagagacaggcgaaactattgagtgggtggacatcgac
cccgaggctttcacggagaatggcgagtgggccatcgtccatcgtccaggcaggaagata
atcaacacacggtacaccaaagatgaccttgagtatcaggagatcttgttcaatctggtc
atccaaagaaagcccctcttctacgtcgtcaacatcatcctgccctgctccctcgtctcc
tcgttggtggtgctggcctacttcctacctgcacaagccgggggacaaaagttgaccgta
tccatctctgtcttgctggctcagactgtcttcctctttcttattggccagaggatccct
gagacatcgctctcggtgcctctcatcggcaagtacctgatctttgtaatgtctgtcact
actctcattgccacgaatcaaatagtggtgctgaacatctccctgcgtagccccagcact
cataccatgtctaagaccatcaaacatgtgtttctggaaatggtacctcgcttcctgggc
atggccccactggtggatgacagtgaggtgacaaccgaggtgaacggagtgagggagcgg
cggcgcagctcctttggcctcatgcagagagcagaggaatatgtactgaagcaacctcgc
agtgaaatgatgtttgacaaacaaagagagaagcacggtctcacacgatccattgtggat
aatatggatatcagcagcaccgctaacctgtataagagtttggcccaagctgcacccgag
atcaagcaatgtgtggatgcctgcaacttcattgctgagagtatgagacaacaaaatacc
atcggatctgaaattgaatgctggatactgattgggaagatgatcgacaaggtgtgtttc
tgggctgccattctcctcttcatcaccggcacagtgtggatcttcttaacgggacacttc
aatcgggcgcctgagttcccgtttccgggacagaccaaaaaatatgttccgagttaa
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