| Entry |
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| Symbol |
vps54
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| Name |
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
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| KO |
| K17600 | vacuolar protein sorting-associated protein 54 |
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| Organism |
pswi Pseudoliparis swirei (Mariana hadal snailfish)
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| Brite |
KEGG Orthology (KO) [BR:pswi00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:pswi01009]
130189529 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:pswi04131]
130189529 (vps54)
Protein phosphatases and associated proteins [BR:pswi01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130189529 (vps54)
Membrane trafficking [BR:pswi04131]
Endosome - Golgi transport
Tethering complex
GARP complex
130189529 (vps54)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
24:complement(2403353..2420917)
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| AA seq |
999 aa
MMLASWEAPPNAMASSHGSSPAPRGGRDGTYRKERDAAPARCRSVRSLPDVCPKDPAGDG
RGLCDGPSVVAEHDRWTVYSSKVNLPAALNDPRLAKRESDFFTKTWGLDFAETEVMPSFY
LPNITREHFGPYLQETAQRERIHERCKTICPNKDDVDAASSIAASHEKSRVELEQVPKIF
MRPDFGLEDPTTFHSVLPWSHFNSAGGKSNRDVASSKLLQEKLSHYLDVVEVSIARQISL
RSDAFFHAMSSQHDLQDRLQETQRAVAVLRDRTAAIDRITCRGPLQALRTALTRSNCAKL
HDKLKLMAAVHQTQPTVQLLLATAEFVGALELISTTKEVLQQELQGIHSFRHLGSQLCEL
EKLIDKMMVEDFSMYARSDLNRSLRDEPLVLEKGHKPNAASQKERLESLVFGLLRQRKLD
FLDIYSDEMIAAAKAIVSQCVTENVLHMEDIDTEVVTKLADQMRLMTFPQWFELLENIFQ
SFLLFLQKIKATLTVVKNVVLEVLASNQRNRLLEEGSSSGAPAQEGPPGPALLHGEAELA
YLTHEGLFISDALHQAQQQAVQDQGSDVGSRVQQSRAEAPGSDPAQTSVSRDQSFMYGTA
QMCGDSMMPTDQELNRVVHNLQELLHAASDVSHDRCVKVLTARAKDGSLERLGSADFVCL
CRAVETFVGDTEELSCRRSGSLRGALQSQANRFVHRFHDERKTKLSLLLDNERWKQAEVP
TEFQDLVNSIADGRITLPERKIPGTEDRKPAEFLLVNGQKYAVVGTVLLLIRMFLEYCQC
INDIPSIATDMLTRLSDLLKHFNSRSCQLVLGAGALQVVGLKTITTKNLALASRCLQLVV
HYIPVIRAHFETKLQPKQFSVLRHFDHITKDYNDHVAEISAKLVAIMDSLFEKVLSKYEV
KAPMPSACFRNVCKQMSKMHEAISELLPEEQMQMLFLRINASLKMHLKRQLARLGVVNDG
GPQHGLVVVDVAFYTENVQALKNLDRLDLNMVEIWEQKR |
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| NT seq |
3000 nt +upstreamnt +downstreamnt
atgatgctagcctcctgggaggctcctcccaatgccatggcgtccagccacggctcctcc
ccagcgcctcgcggaggccgagacgggacgtaccgcaaggagcgggacgcggcgccggcc
cgatgccggtccgtccgctcgctgcccgacgtctgccccaaggatcccgccggcgatggg
cggggcctgtgcgacggcccgtccgtggtggcggagcacgaccggtggacggtgtacagc
tcgaaggtcaacctgcccgccgcgctgaacgacccgcggctcgccaagcgggagtccgac
ttcttcaccaagacgtgggggctggacttcgcagagacggaggtgatgccctccttctac
ctgcccaacatcacccgggaacacttcggcccctacctgcaggagacggctcagagggaa
agaatccacgaacgctgcaagacgatctgtcccaacaaagacgacgtggacgccgcctca
agcatcgccgccagccacgaaaagtccagagtggagctggaacaagtcccgaagatcttc
atgcggcccgacttcggcctggaggacccgaccaccttccacagcgtgctgccctggtcg
cacttcaacagcgccggagggaagagcaaccgagacgtggcgtcctccaaactgctgcag
gagaagctgagccactacctggacgtggtggaggtgagcatcgcgcggcagatctctctg
cgctccgacgccttcttccacgccatgtcgtcgcagcacgacttgcaggaccggctgcag
gagacgcagcgcgccgtggccgtgctgcgcgaccgcaccgccgccatcgaccgcatcacg
tgccgcgggccgctgcaggcgctgcgcaccgcgctcacgcgcagcaactgcgccaagctg
cacgacaagctgaagctgatggcggcggtgcaccagacgcagcccaccgtgcagctgctg
ctcgccaccgccgagttcgtcggagcgctggagctcatctccaccaccaaggaggtgctg
cagcaggagctgcagggcatccacagcttcagacatctgggctcccagctgtgtgagctg
gagaagctgatcgataagatgatggtggaggatttcagcatgtacgcccggagcgacctg
aaccgcagcctgagggacgagccgctggtcctcgagaaggggcacaaaccaaacgctgcc
tcacagaaggagcgtctggagtctctggtgttcggcctgctgcgccagaggaagctggac
tttctggatatttacagcgatgagatgatcgcggctgcgaaggccatcgtctctcagtgt
gtgacagaaaacgttttgcacatggaagacatcgacactgaagtcgtcaccaagctagcg
gaccagatgcgcctcatgacgttccctcagtggttcgagctgctggagaacatcttccag
agtttccttctcttcctccagaagatcaaagccaccctgactgtggtcaagaacgtggtc
ctggaggtcctggcctcgaaccagaggaaccggctcctggaggagggctcctcgtcgggg
gctcctgctcaggagggcccccccggcccggcgctgctgcacggggaagccgagctggcc
tacctgacccacgagggcctgttcatcagcgacgccctgcaccaggcccagcagcaggcg
gtccaggatcagggctctgatgtgggctcccgggtccagcagagtcgggcggaggcacct
ggcagcgacccggcccagacctccgtcagccgggaccagagcttcatgtacggcaccgca
cagatgtgcggtgacagcatgatgcccacggaccaggagctgaaccgcgtggtccacaac
ctccaggagctgctgcacgccgcctccgacgtcagccacgaccgctgcgtcaaggtcctc
acagccagagccaaggacggctctctggagcgcctgggctcggcggacttcgtgtgcctg
tgccgggcggtggagacgttcgtgggcgacacggaggagctgagctgcaggcgcagcggc
agcctgcggggggcgctgcagagccaggccaaccgcttcgtgcaccgcttccacgacgag
cgcaagaccaagctcagcctcctcctggataacgagcgctggaagcaggccgaggtcccc
actgagtttcaggatctggtgaactccatcgcggatggaagaataacactaccggagcgc
aaaatcccaggtactgaggacaggaagcccgccgagttcctgctggtcaacgggcagaaa
tacgccgtcgtcgggacggtgctgctgctgatccggatgtttctggaatactgtcagtgc
atcaacgacatcccgtccatcgccaccgacatgctgacgcgcctgtcggacctcctcaag
cacttcaactctcggagttgccagctggttctgggagccggagctctgcaggtcgtcggc
ctgaagaccatcaccaccaaaaacctcgccttagcctcccgctgcctgcagctggtggtt
cactacattcccgtcatcagagctcactttgagaccaaactgcagcccaaacagttcagc
gtgctccgacactttgaccacatcaccaaggactacaacgatcatgtggccgagatctcc
gctaagctggtggccatcatggacagcctgtttgagaaggtgttgtcgaagtatgaagtg
aaggccccgatgccctcggcctgcttcagaaacgtctgtaaacagatgtcgaagatgcac
gaagccatttcagaacttctacctgaagaacagatgcagatgttgtttctgaggatcaac
gccagtttgaagatgcacctgaagaggcagctcgctcgactcggagtcgttaatgacgga
ggacctcagcatggactcgtcgtggtggacgtggcgttctacacggagaacgtccaggcg
ctgaagaacctcgaccggctggacctgaacatggtggagatctgggagcagaagaggtga |
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