Pseudoliparis swirei (Mariana hadal snailfish): 130189576
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Entry
130189576 CDS
T09868
Name
(RefSeq) homeobox protein OTX1 B-like
KO
K09326
homeobox protein OTX1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130189576
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130189576
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
PGA28-like_dom
Homeobox_KN
CPSF73-100_C
GIP4
DEC-1_N
Motif
Other DBs
NCBI-GeneID:
130189576
NCBI-ProteinID:
XP_056264425
LinkDB
All DBs
Position
24:2336377..2342483
Genome browser
AA seq
340 aa
AA seq
DB search
MMSYLKQAPYGMNGLGLSGAAMDLLHPSVGYPGNPRKQRRERTTFTRTQLDILESLFGKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSSNSAKAKPMKKKSSPARESTG
SESSGQFTPPAVSSSSSSSSSSTTSSSGLGGPGLLAAAAPVSSIWSPAPISPAPAPASLP
DPAAVAPASASCMQRSASSTGGGGAPSYPVSYSQTAAAYGQGYPAAASGSYFGGVECGSY
LAPMHSHHHPHHPHQLSPMTGGAMSGHPHHHIGQTSGHHHHHHHQSHHHQAYSAPGLAFN
STECLDYKEQTAAASAWKLNFNASDCLDYKDQAAWRFQVL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttatctcaagcaggccccgtacgggatgaacggactgggcctgagcggggcc
gccatggacctgctgcacccgtctgtggggtaccccggaaacccgcgcaagcagcgccgc
gagcgcaccacgttcacgcgcacgcagctggacattctggagtcgctgttcggcaagacg
cgctaccccgacatcttcatgcgggaggaggtcgcgctgaagatcaacctgccggagtcc
cgggtgcaggtctggtttaagaaccgccgggccaagtgccggcagcagcagcagagcagc
aacagcgccaaggccaagcccatgaagaagaagtcgtccccggcgagagagagcaccggc
tccgagagcagcggccagttcaccccgccggcggtgtccagctcctcctcctccagctcc
tcctccaccacgtcctcctccggcctcggcggtcccggtctgctcgccgccgccgccccg
gtgtcgtccatctggagcccggcgcccatctccccggccccggcgccggcctcgctgccg
gaccccgccgccgtggcccccgccagcgcctcctgcatgcagcgctccgcctcgtccacc
gggggcgggggggcgccgtcctacccggtgtcctacagccagacggcggcggcgtacggc
cagggctacccggccgcggcgtcgggctcctacttcggcggcgtggagtgcggctcgtac
ctggcgcccatgcactcccaccaccacccgcaccacccgcaccagctcagccccatgacc
ggcggcgccatgtcgggacacccgcaccaccacatcggccagacgtcggggcaccaccac
caccaccaccaccagtcgcaccaccaccaggcctacagcgcgccgggcctcgccttcaac
tccacggagtgtctggattacaaagagcagacggcggcggcgtcggcctggaaactcaac
ttcaacgcctccgactgtttggactacaaagaccaggcggcgtggcgcttccaagtgctg
tga
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