Pseudoliparis swirei (Mariana hadal snailfish): 130189592
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Entry
130189592 CDS
T09868
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130189592 (sorcs3a)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Others
Others
130189592 (sorcs3a)
Endosome - Lysosome transport
130189592 (sorcs3a)
Endosome - Golgi transport
130189592 (sorcs3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
130189592
NCBI-ProteinID:
XP_056264440
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All DBs
Position
24:complement(14105424..14364712)
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AA seq
1242 aa
AA seq
DB search
METWAGFCPGLHLSLGIWLLIAAQTLQHAKAEITCASCASPVQLHVEELELGRPMSTDPT
GEPGTLKHIRLEFRELAVPDQNTGVDADHETVVSVEDVPQFPQHVSLIGVSAKEDASGSS
EVSPRGSERAGEPEKSEGAALRRAKRSGPEFSEFSENGRTGRTSMDADAPEDRGSLFDGH
KQGKSGFRWNRDEARGNNRQDEPKLTSSTFSLSGDSAHNHAVVYWSGQNSSVILILTKLY
DFHIGSVTESTLWRSTDYGSTYERMNDRVGTKTVLSYLYVCPTNKRKIMVLTDPEFESSL
LISSDEGTSYQKYRLTFYVLSLLFHHTEEDWALAYSHDQKLYSSVDFGRKWQIIHERVTP
NRFYWSVSGLDKEPDLVHMEAHTPDGNVQYVTCRAPMCTEANRNYPFPGYIDISSLVVQD
DYIFIQVPTSGRATYYVSYTRDSFIQIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQNDT
YNLYLSDTRGIYFTLAMENVKTTRGLGGNQMLDLYEVAGIKGMLIANKRQDNQVKTYMTY
NKGREWRLLQAPTTDLDGNDIHCILPFCSLHLQLQMSENPYLSGTISTKNSAPGIIVATG
NIGAELSYNNVGMFISSDAGNSWRQIFEEEHNVWFLDKGGAIVAVKQPSVPTRHLWVSFD
EGRQWTQHSFSLVPLFVDGVLVETGAENQIMTFFGHFSHRSEWQLIKIDYKSIFSRKCTE
EDYQTWHLHNQGEPCVMGQKQIYMKRRPGNYCMLGKDYSKILSAESCICRAHDFECDYGY
ERRGDGNCRPAFWFNPSTVSRSCSQGQNYLNSTGYRKVVLNNCTKGVKEMYMARKQQCPI
RSPKGLLLTTKDGKLTANLDSNITFLVHLDEGDSLRTNIQLDFGDGTAVSYSNLSWTEEG
IKHIYKSAGIFRVTALAENTLGYDSTTLFLHVTCPVEHVRLLAPFVVIKNKEVNITAVVL
PSHSRTVTFFWWLDNNTEPVVTLDGSISHTFPDDGMHTITVQVAAANAILQDTRTIAVKE
FFKSLLLSFSPNLDEFNPDIPEWRQDVGRVIKKALLQVSDFPEEQLLVAVFPGVPTAAEL
FLLPHKNQSEGKKKSEEGLEQVSDIIVSALNQNLVEFELKPGVRVIVYNTQLTLAPLVDS
NPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGSVGQGDSTP
KITLSEFPTSKELMEKELDARVKRGVGNACESTREIPNCTSV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggagacttgggctggcttttgcccaggcttgcacttatctctgggtatctggctgctg
atagccgctcaaaccctccaacatgccaaggcggagataacttgcgcatcttgtgcgtcg
ccagttcaacttcacgtggaagaattggagctgggtaggcctatgagcactgacccgaca
ggagaaccgggcaccctaaaacacatccgattagagtttcgggaactcgcagttcccgac
caaaatactggagtggacgccgaccatgagacagtcgtttctgtcgaggatgtgccccag
ttccctcaacacgtcagtttaattggagttagcgcaaaggaagacgcatcggggtccagt
gaagtaagtccccgcggcagtgagagggcaggggaacccgagaagagtgagggtgctgcc
cttcgaagagcgaagagaagcggtcctgagttttccgagttcagcgagaacgggcggacc
ggccggaccagcatggatgcggatgctccggaggatcggggctcattgtttgacggccac
aagcagggcaagtccgggttcagatggaacagggatgaagcgagagggaataaccggcag
gatgagcccaagctgaccagcagcactttctctctgtcgggggactctgcgcataaccac
gcggtggtttactggtcaggacagaacagcagcgtgatcctgatcctcaccaagctgtat
gactttcacattggcagcgtcactgagagcactctttggagatccactgactacggctcc
acatacgagagaatgaacgaccgggtcggaaccaagaccgtcctgagttacctgtacgtc
tgtccgacgaacaagagaaagatcatggtgttgacggatccagagtttgagagcagcctg
ctcatcagctccgatgagggaaccagttaccagaagtaccgcctcactttctacgtcctg
agcctcttgttccaccacacggaagaggattgggccttagcctacagtcacgaccagaag
ttgtacagctcggtggactttggaagaaaatggcagatcattcacgaacgtgtcacacca
aacagattctactggtctgtctccggcctcgacaaggagccagatctggtgcacatggag
gctcatacaccagatggaaacgtgcagtatgtcacatgcagagctccaatgtgcacagag
gctaacaggaactacccattccccggatacatcgacatcagctctttggtggttcaagat
gactacatattcatacaggttcctacatcaggacgagcgacctattatgtgtcctacacg
agagactcctttatacaaatcaaactacccaaatattccctgcctaaggatttacacatt
gtcagcaccgatgagaagcaggtgtttgctgcggtgcaggagtggaaccagaacgatacc
tacaacctctacttgtctgacacgagagggatctacttcactttggccatggaaaatgtc
aagaccacgaggggcctcggagggaaccagatgctggatctgtacgaggtggcgggaatc
aaaggcatgttgatcgctaacaagaggcaggacaaccaggtcaagacctacatgacctac
aataaaggccgggagtggaggctcctgcaggctcctaccaccgacctggatggaaacgac
atccactgcatactgcccttctgttcacttcatctccaactgcagatgtccgagaaccct
tacttgtcaggaacaatctccaccaagaactctgcaccagggatcatagtggccacaggg
aacattggagcggagctgtcttacaacaacgtgggcatgttcatatcatctgatgccggc
aatagctggagacagatttttgaagaggagcacaatgtgtggttcctggacaaaggaggg
gccatcgttgctgtcaaacagccgtcggtgccaaccagacacttgtgggtcagctttgac
gaggggaggcagtggacccagcacagcttctccctggtgcctctgtttgtggatggggtc
ttggtggagactggggctgagaaccaaatcatgaccttctttggacacttcagtcatcgt
tctgaatggcagctcatcaagattgactacaagtcaatttttagcaggaaatgcacagag
gaagactatcagacctggcaccttcacaaccagggtgagccgtgtgtgatggggcaaaaa
cagatttacatgaagcgcaggccgggaaactactgcatgctgggaaaggactactccaaa
atcctttcagctgagtcctgtatttgtcgagctcatgattttgaatgcgattacggatat
gagcggcgcggcgacgggaactgccggccagccttctggttcaacccctccactgtctcc
agaagctgcagccagggtcaaaactacctcaacagcacagggtaccgcaaagtggtgttg
aacaactgcactaaaggagttaaagaaatgtacatggccagaaagcagcagtgccccatc
agatctccgaaaggacttctgctgaccaccaaagacggaaaactcacggccaacctggac
agcaacatcaccttcttggttcatctggatgagggcgactctctgcgtaccaacatccag
ctggatttcggcgacggcacagccgtgtcctactccaacctgagctggaccgaggagggg
atcaaacacatctacaagtctgctggaatattccgtgtcacagctctggcagagaacacg
ctcggttacgattccaccacactgttcctgcacgtcacatgcccagtggagcacgtccgg
cttctcgctcccttcgtggtcataaagaacaaggaggtgaacatcacagcagtggtccta
cccagccactcgcgcactgtgaccttcttctggtggctcgacaacaatactgagcccgtg
gtaacgttggacgggagcatctcacacaccttccccgacgatggaatgcacaccatcact
gtccaagtggctgcagccaacgccatactgcaggacaccaggaccatagcagtcaaagaa
ttcttcaaatctctacttttatctttctccccgaatctggacgagttcaaccccgacata
cccgagtggagacaggacgtggggagagtaattaagaaggctttgctccaagtttctgac
ttcccagaggaacagctcctggtcgccgtgttccccggagttccaacagctgctgagctc
ttcctgttaccgcacaagaaccaatcagagggcaagaaaaagagcgaggaggggctggag
caggtatctgatataatcgtgagcgctctgaaccaaaatctggtcgagttcgagctcaag
ccgggtgtgagggtgattgtgtacaacacacagttgacactggcaccgctggtggactcc
aacccccgacacagcagctccgccatgctgatgctcctctcagtggtgttcctggggcta
gcagtgttcctcatctacaaattcaagagaaaaataccttggatcaacatctacgccgag
gtgaaccaggagaaggagcaggagatgatcggctcggtgggccagggtgacagcacgcct
aaaatcactctgagtgagttccccacatccaaagagctcatggagaaagaactggatgcc
agggtcaaacgaggagttggaaatgcctgcgagagcacgagggagattccaaactgtacc
agcgtgtga
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