Pseudoliparis swirei (Mariana hadal snailfish): 130189595
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Entry
130189595 CDS
T09868
Name
(RefSeq) ras and Rab interactor 2-like isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130189595
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130189595
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
RA_2
Lpg0393_VPS9
RelB
Motif
Other DBs
NCBI-GeneID:
130189595
NCBI-ProteinID:
XP_056264441
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All DBs
Position
24:14834375..14863671
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AA seq
991 aa
AA seq
DB search
MASSSPPRNALSGLTDRSGSFFKLIDTFALEIGELKREMVQTSPTANREPMDLRGLEGEV
SGVYLQSPHCGGQGGERDSGYDSLRRRMSVLDRLSQTHPVWLLLAVSEEEASRILLRQPP
GVFLVRKSAALQRKVLSVRVKEDPSGTPISHFPVRESQYTFSLEESGISFADLFRLVAFY
CISRDVLPFTLKLPEAIASAKTQKELEEVSQLGAGFWDSALCSQRRPSPRPCRPLSRTLS
PQRTNRNREVEASRLWHTGAHCDSAPPTLRSSAPPPTFHLERRHSSGPLCFVNPLFLQTH
RHHHRREDDSPSHAVKSDSKLENAERSPVKPLSSGQGSEQHVDDTKLSAKSRPPPPRPPP
PRSMPRRRPAPPPPGPPVATSRLKSMPEAVVVSTKQQPSSSKRRAPARPSMGAKHSSPSK
TTSSPVPVPSNPPPPRPKKPDLEAHRCHIALDDETIAKALSQAKLPPCQPPPAAPAGVLL
EKNAGTPRRQRLSDMSMSTSSSDSLDYTQSPGFSMGLAPSPSRHLTHQDPVEDSSEDDED
KEEDEEEDYGVGLETDLEMRHRPSFKARKRMVGVSLSGGSFILPRALKGRFLQVSGMLSS
LMTPERRAVKRIAELSRDKSSYFGSLVQDYISFVQENRGCHTTGMDFLQTLRQFMTQMKA
YLHQSSELDPPIESLIPEDQIDQVLEKAMHKCVLKPLRSVIEMVLQDFQVSSGALQQLRE
NLALAKAKRPQELGVDGAVPPDPEAIEKIRHKFLNMRKMYSPEKKVSLLLRVCKIIYTIM
QDNSGRMFGADDFLPMLTYVVAQCDMPQLDTEIQYMMELLDPALLQGEGGYYLTSAYGAM
ALIKNFQEEQAARVLSSEARNTLHQWHRRRTTQRSASSVDDFQNFLRVALEEEDTCCTAK
TLIVHPYTTTEEMCSLCADKLKIPDPDTFALFLVTKDSSQQLAPDTHPQRIKAELHCRPR
AQVFRFIYKRIPNLNLCVPAIMQNGNCLQIE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagctctccgcccaggaacgccctgagtggcctcacagacaggagcgggagc
ttctttaagctgattgatacatttgcattggagattggggagctgaagagagagatggtc
cagacctctccgacagccaacagagagcccatggatctacgagggctggagggtgaggtg
agcggcgtttacctgcagtccccccactgtggcggacaggggggcgagagggattcggga
tacgactctttgcgaaggaggatgagcgtgttggacaggctgagtcaaacccatccggtg
tggctgctgctggctgtcagtgaagaggaggccagtcgcattctgctccggcagccccct
ggggttttcctggtcaggaaatcagctgcgctgcagagaaaggttctgtctgtgcgtgtg
aaggaggatccgtcgggaactcccatcagccacttccccgtcagagagagccagtacacc
ttttcactcgaggaatctgggatcagctttgcagatctgtttcgcctggtggccttctac
tgtattagcagggatgtcctgcctttcacactcaaactcccagaggccattgcgtcggct
aagactcagaaagaactggaggaggtgtctcagctgggagcaggcttctgggactctgcc
ctgtgcagtcagcggcgcccttccccccgtccctgtcgccctctgagccgtaccctcagc
ccccagcggactaacaggaacagggaggtcgaggcgtcacggctatggcacaccggggct
cactgcgacagtgcacctccgaccctgaggtccagcgctcctccacccacctttcatctt
gagagaagacattccagtggtcccctgtgctttgtcaaccccctgtttctccagactcac
cgccaccaccaccggcgtgaggacgactcgccttcacatgctgtcaagtccgatagcaaa
ctagagaatgcggagagatcgcctgtgaagccgcttagcagcggtcaagggagcgagcag
cacgtggacgacaccaaactgagcgccaaatcgcggccacctcccccacgccctcctccc
ccacgctcgatgccgcgccggcgccctgccccaccaccacctggacctccagttgcaacc
agcagactcaagagcatgccagaggccgtggttgtgtccacaaaacagcaaccgtccagc
agcaagcgccgggctcccgctcgaccttcaatgggtgccaagcatagcagcccttccaaa
actaccagctcaccagtacctgtgccctcaaaccccccacctccaaggccaaagaagcct
gatctggaagctcaccgctgccacattgccctggatgatgagaccattgccaaggctttg
tcccaggccaagcttccaccctgccagcctccaccggctgcccctgctggtgtgctgctg
gagaagaacgctgggactccaagacgccagcggctcagtgacatgagcatgtccacttcc
tcctcggactcactggactatactcagtctccagggttctccatgggactggcccctagt
ccatcccgacacctcactcatcaagacccagtggaggacagcagtgaagacgatgaggac
aaggaagaagacgaggaggaagactacggcgtcggtctggagacagacctagaaatgcgc
caccgtccttccttcaaagcacgaaaacgaatggtcggcgttagtctgagcggtggctcc
ttcatcctcccaagggctctgaagggacgcttccttcaggtgagcggcatgctcagctcc
ctcatgacccccgagagacgggcggtgaaaaggatcgctgaactgtccagggacaaaagc
tcatattttggctccctggtccaggactacattagctttgttcaggagaaccgaggctgt
cacaccacaggaatggattttctgcagactctcaggcagtttatgacacagatgaaggct
tacctgcaccagagctccgaactggacccccctatcgagtcactcataccggaggaccag
attgaccaggtgctagagaaggccatgcacaagtgtgtcctaaagcctctgaggagtgta
atcgaaatggttttacaggacttccaggtgagcagcggcgctttgcagcagctgagggag
aacctggccctggctaaggctaagaggccgcaggagttaggggtggacggagccgtgcct
cctgaccccgaggctatcgagaagatccgccacaagttcctgaacatgaggaagatgtac
tcccctgagaaaaaggtgtcattgctgctgcgtgtgtgtaaaatcatctacaccatcatg
caggataactcagggaggatgttcggtgccgacgacttcctgcccatgctgacttatgtg
gtggctcagtgtgacatgcctcagctggatacagagatccagtacatgatggagctgctg
gacccggcactgctgcaaggagaggggggctactacctgaccagtgcctatggagccatg
gccctcatcaagaacttccaggaggagcaggcagcacgggtgctgagctctgaggccagg
aacactctgcaccagtggcacagacggcgcaccacccagcggtcagcgtcgtctgtggac
gattttcagaactttctccgtgtagctctggaggaagaggacacatgctgcacggccaaa
actctgatcgtccatccgtacacaaccacggaggagatgtgctcactttgcgctgacaag
ttaaagatcccggatcctgacaccttcgcactgtttctggtcaccaaggacagtagccag
cagctggccccggacacacaccctcagcggatcaaagccgagctccactgccggccccgg
gcccaggtcttccgctttatctacaagaggataccgaacctcaacctctgtgtgcctgcc
atcatgcaaaatggaaactgccttcaaattgaatag
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