Pseudoliparis swirei (Mariana hadal snailfish): 130189598
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Entry
130189598 CDS
T09868
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130189598 (toporsa)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130189598 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130189598 (toporsa)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130189598 (toporsa)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130189598 (toporsa)
UBL E3 ligases
130189598 (toporsa)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
130189598 (toporsa)
Cilium and associated proteins [BR:
pswi03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130189598 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-ANAPC11
RING_XB3-XBAT31
Baculo_IE-1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
130189598
NCBI-ProteinID:
XP_056264446
LinkDB
All DBs
Position
24:complement(10616951..10621329)
Genome browser
AA seq
764 aa
AA seq
DB search
MSAIKIALEQSQKKSRRKTSEAMFADVSPNSKCPICLDTFHNISYLDVCLHKFCFRCIHE
WSKNKAECPLCKQSFNSIYHTIKSEQDFKKYDLQPVENASFGTFGGVRFRYRTTLTGVHR
QMRGRTSPPLDNGVMFEASASAPQQSQDRYIRQMMMRLAAQRRAASEGRAVNSLREQEMV
NFRRELYRRGVKIRSVRDGGRSRETSAEFFRRNPACLHRLIPWVKRELIVLYGAHGSLVN
IVQHIIMSRITRFDMEDGAIQEELRPFLQGRTEHFLHEFISFAKSPFNMEAYDQHAAYDC
PPTFSNEDSSSSSSVIAISEADEHSVDLNPPGDSASSLSHSMWDDETPGPSYSTTAEQGR
VECLSVLDSDSDSSLEEETDKTQAEVNNEECLSYDSDDCVIIHFFKPTSERTPELVQLSS
DSDESASEDIKAVPLLPQHIRFSSLSPQASQSSDPSGAGQSEHIETDQSHQLDSKERCSS
SASSRHKTSSKSDKKDRSRERHLSTDRDHRRKRRSRSAELRQSSRSPEISHISVGTLSRE
GGYSYSSGRDYSKCDDNYRKRDRDHSYQSYQHYSQERNDSGMHYTERRSDYYSSRKYTDR
HSSSRSRSRDRRRRDRHSRSRTYSSSRSPSMKKRSHNNKPGGKRKYKTRHLEETSQNALS
NSNAEGDAPILSTKHKKKSKEKRRKKSKDRSRKTSRSLSVELVNEEISHERSKRHHKKKK
KQKKKSKRHKSDERTEKQSPTVITIDSDSESFASDTEPCQQHLQ
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaatcaagattgccctggagcagagccagaagaagagcagaaggaaaacctct
gaagcaatgtttgcagatgtgtcgccgaactccaaatgtcccatctgtttggacacattt
cacaacatttcttacctggacgtctgcctgcacaagttctgtttccgctgtattcatgag
tggtccaagaacaaagccgagtgccctctatgcaaacagtcctttaattcaatctatcac
actataaaatcagaacaagactttaagaagtatgacctgcagccggtggagaatgcctct
tttgggacgtttggtggagtacggtttagataccgcacaactcttaccggagtccatcga
cagatgcggggaaggacctctccacctttagacaacggagtaatgtttgaggcctcagca
agcgctccccaacaatcacaggaccgctacatccggcagatgatgatgaggctggccgct
cagagaagagctgcgagtgaaggcagggcagtgaacagtctcagagagcaggaaatggtg
aacttcaggagggaactgtatcgacggggggtgaagattcggagtgtccgtgatggtggc
cgctcccgagaaacctcggcagagttcttccgaagaaatcctgcttgcctgcatagactg
atcccctgggtaaaaagagaactgattgtgctttacggagcccatggctctttggtcaac
atagttcaacacatcatcatgtcgcgcattacacgttttgatatggaggatggagctatt
caagaagagctgaggccgttcctccaggggcgtacagagcactttctgcatgagtttatt
agctttgcaaagtctcccttcaatatggaagcctatgaccagcatgctgcctatgactgc
ccacccactttttcaaatgaagacagcagctccagttcgtctgtaatagctatctcagag
gctgacgaacactcagtggatttgaaccccccaggagactccgcgtcttcgctaagccac
tctatgtgggatgatgagacgcctgggccatcctattctacgacggcagagcagggcagg
gtagagtgtctctcggtcctcgactcagactcggacagcagtttagaggaggagacagac
aagactcaggctgaagttaacaatgaagagtgtctgtcctatgacagcgatgactgtgtc
attatacatttttttaagccaacatcagagaggactccggagctggttcagctgtcctct
gactctgacgagtctgccagtgaagatattaaagcagtgcctcttctacctcaacacatc
cgcttctctagcctcagtcctcaggcatcacagagtagtgatccgagtggtgctggacag
tcggaacatatagaaactgaccagtctcatcagttggattcaaaagaaagatgtagctct
tcagcatctagcagacacaagacatccagtaagtcagacaaaaaagacagatcaagggag
aggcacttgtcaacagacagggaccatcggcgaaagaggaggtccagaagtgcagagctc
aggcaatccagcaggagcccggagatttcccacatcagtgtcggcacattatccagagaa
ggaggttattcatactcgagtggaagagactactcaaaatgtgatgacaattacaggaag
agagaccgtgatcacagctatcagtcatatcagcattacagccaagagagaaatgatagt
gggatgcattatacagagaggcggtccgactattacagcagccgcaagtacacggatcgt
cactctagctccaggagccgcagcagggacaggcgtagacgggacagacattctcgttct
aggacttattccagcagtcgctccccttcgatgaaaaagagatctcacaacaacaagcct
ggtggaaagaggaagtacaaaaccaggcatttggaggaaacatcccaaaacgctctttca
aactccaacgctgaaggtgacgcccccattttatccacaaaacacaagaaaaagagcaaa
gagaagcgtcgtaaaaaatccaaagacaggtcaaggaagacgagcaggagccttagtgta
gagctcgttaacgaggaaatctctcacgagcgaagcaagcgtcaccataagaagaagaag
aaacaaaagaagaaaagcaaaaggcacaagagtgatgaacgcacggaaaagcagtcgccc
acggtcatcaccattgacagtgacagcgaatcgtttgcaagcgacactgaaccatgccag
cagcacttacaatga
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integrated database retrieval system
