Pseudoliparis swirei (Mariana hadal snailfish): 130189622
Help
Entry
130189622 CDS
T09868
Symbol
si:ch211-286b5.4
Name
(RefSeq) afadin- and alpha-actinin-binding protein B
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04517
IgSF CAM signaling
pswi04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130189622 (si:ch211-286b5.4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130189622 (si:ch211-286b5.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130189622 (si:ch211-286b5.4)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
130189622 (si:ch211-286b5.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
SPATA24
Motif
Other DBs
NCBI-GeneID:
130189622
NCBI-ProteinID:
XP_056264486
LinkDB
All DBs
Position
24:22042523..22048586
Genome browser
AA seq
440 aa
AA seq
DB search
MASRFGLKTVGRCSESSDSQDPSPVKELSHSSSWWADREEQGDELREHLKEMDTHVARLQ
DMLICEQAKCTRLQLRCNQQEAELRLREQHTNRLKERLSQLTDRHREKGPSIEVLNFPPG
GRGKRETPIKPFRPTAKWEEATLRLMLERREAELREAMKLRHSLTTLLHALRVDMEHTLP
DVVDVQEEVQSEDRRLDEAERALGDHVTGGVVSSWRQVQKRLGDVPSEGGLTDVDTDHGK
LLARLEPELEESRDLVRLQQQMMEDSLASPATAELADSYFLEEWERLQVHWAELYHQRRT
FERERQSFTDAAIRLSHERRDFEQQKAALLKQQYLCDSPLSAQEAASHNTRGSTALDFSR
LGPTSISDRLPITPSSSSKSGTAALPGSREGGVQTPSTPELYSALNLSYNCREVDGQSET
WDGPVDGIDTRQAAHLDWSF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaggtttggcctgaagacagtcggaagatgctcggagtcctcggactcccag
gatcccagccctgtgaaggagctctctcacagctcctcctggtgggctgaccgggaggag
caaggagacgagctcagggagcatctaaaggagatggatacacatgtggccaggcttcag
gacatgctgatatgtgaacaggccaaatgcactcgtctgcagctgcggtgtaaccagcag
gaggcggagcttaggcttagagagcagcacaccaacagactgaaggagcgattgtctcag
ctgaccgaccgacacagagagaaaggaccctcaatagaggtgttgaactttccgcctgga
ggtcgaggcaaaagagaaacgccaatcaaaccattcaggcctactgccaaatgggaagag
gcgacgctgcgtctgatgctggagcgcagagaagcagagctcagggaggccatgaagctg
cgccacagcctcaccactttactccatgcactccgagtcgacatggagcataccctgccg
gatgtggtggatgttcaggaagaagtccaaagtgaagacagaaggctggacgaagctgag
cgagcgcttggtgaccatgtgacaggaggtgtggtgtccagttggaggcaggtgcagaag
agactgggtgacgtcccatctgaaggaggcctcactgacgttgataccgaccatgggaag
ctcctggctcgactggaacctgaactggaggagagtcgagaccttgtccgattacaacag
cagatgatggaggacagccttgcgtcacccgccaccgctgaactggccgattcctacttt
ttggaagagtgggaacgtcttcaggtgcactgggccgagctctatcatcagcggcggact
tttgaaagggagaggcagtccttcaccgacgctgccatccgactgagccatgagcgtcgg
gattttgagcaacagaaggccgccctcctgaagcagcagtatctgtgtgactcccccctg
tctgctcaggaagcagcgagccacaacacgagagggagcacagcactcgatttctcacgt
ttggggcccaccagcatatctgaccgtcttcccattacgccatcgtcttcctccaagtcg
ggcacggctgctcttcctggatcccgagagggaggagttcaaaccccaagcacccctgag
ctgtactctgccctcaacctgtcatacaactgcagagaggtcgatggccagtcggagaca
tgggacggcccagtagacgggatagatacacggcaggctgcacacttagactggtctttt
taa
DBGET
integrated database retrieval system
