Pseudoliparis swirei (Mariana hadal snailfish): 130189690
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Entry
130189690 CDS
T09868
Symbol
pex6
Name
(RefSeq) peroxisomal ATPase PEX6 isoform X1
KO
K13339
peroxin-6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130189690 (pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130189690 (pex6)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
130189690 (pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
Pentapeptide
AAA_22
AAA_33
TIP49
RuvB_N
AAA_5
AAA_18
DUF815
NPHP3_N
AAA_7
TsaE
RNA_helicase
Vps4_C
nSTAND3
Mg_chelatase
AAA_28
T2SSE
AAA_25
AAA_14
Pentapeptide_3
AAA_17
Glyco_hydro_19
AAA_24
Parvo_NS1
IstB_IS21
DUF6002
PhoH
Motif
Other DBs
NCBI-GeneID:
130189690
NCBI-ProteinID:
XP_056264596
LinkDB
All DBs
Position
24:11604347..11612797
Genome browser
AA seq
1124 aa
AA seq
DB search
MAAQVELCCLESFPSHLSPLDVLVLQTQLHSVFQNDTDPPTALFTPQRPRGSGGPGILLR
VHPTTEEEIAGCGGGGDSPGAELGIRVRVFTSRFFLRHHGLQGLGSSTGTLRALEPIPLE
RLVLGARSRQSLLWAGAERFTGGLLELCRPGQWLLARRGDPLLLPRHPLLGEDPAQVQQQ
LMELLVLDCSPVTQGRITADTALVLTDCPDSADPPGAAPACRPLRLCVSDFAHYADGLAG
GRSLLDSELLRSGLSGPSGLSGVLQALECRLDVQVVDTGRWLGVKGQQGAADVDNCVFVS
KRLLLRLGLFNQEWVKLSRPGGASRTTGPGLPDVKGAAGRQRLVSVLVVDLTENPDRQNP
DLQNHDEVGFISATLWFNMTEGDEIPVNGCTLRMKRWTPSPPAPAAAARHSDSFSRSSSP
MFAGELHVQPVASPLYNNLGCYGDLLSEHFASPRLVSQGDVLTVPTGHAPDLLESNAEGV
HRCPVLYFRVQKVCLSTEEGGGGGGGGGEEEEGGEEEEALLVDRLHTTLYMRGPAGGPVP
GLSVGGGRSLWSSLCPAGLQTTVELLCSAVSPHLQRSSSLAGCTVLLHGPTGSGKVTALR
AATRRLNLHLLKVDCVAVCADTPAASEAKLSSAFRRAEALRPCVLLLRNLQLLLGRRGDA
REDSRVHAALCRLLRGAPCSVVVVATVRKPRELPAGVAAAFVHRVALESPTEEQRLAMLV
SLSRDLQLGRDVDLERIAKGTAGFVLGDLSALLVEAGRAACRRLIHTCRGRLEEARLEGA
RLEGARLEETRLEETRLEGARLEGARLEETLRSSGVAVLDQDFCSALKTLQEAQSSAIGA
PKIPDVRWEDIGGLQQVKKEILDTVQLPLQRPELLSLGLNRTGLLLYGPPGTGKTLLAKA
VATECSMTFLSVKGPELINMYVGQSEENIREVFSRARSAAPCVVFFDELDSLAPSRGRSG
DSGGVMDRVVSQLLAELDALPTCAGVFVIGATNRPDLLDRSLLRPGRFDKLVFVGLSEDR
ASQLQVLRAILRRLQVDPAVDLQRVLERCPDHMTGADLYALCSDAMTAAIKRKIALIDRG
LDSEDSPLLVCVEDFSSALENFKPSISPKELQRYRNLHRELTAK
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcaggtggagttgtgttgtttggaaagtttcccttcgcacctgagtcccctg
gacgttctggttcttcaaactcaactgcactcggttttccagaatgacaccgacccgccg
accgccctcttcaccccgcagcggcctcggggctccggagggccgggcatcttactgcgc
gtccacccgaccaccgaggaggagatcgcgggctgcggaggaggaggagactcccccgga
gcggagctcgggatccgggtccgggtgttcaccagccgcttcttcctgcggcaccacggg
ctccaggggctcggcagcagcacggggaccctgcgggccctggagccgatccccctggag
agactggtgctgggagcccgcagcaggcagagcctcctctgggccggagccgagcgcttc
accggcgggctgctggagctctgccgcccgggacagtggctgctggcccggcggggagac
ccgctgctgctgccccgacacccgctgctgggagaggacccggcacaggtgcagcagcag
ctgatggagctgctggtgctggactgcagccccgtgacacagggccggatcaccgccgac
accgctctggttctgacggactgcccggactcggcggacccccccggcgccgccccggcc
tgcaggccgctccggctgtgcgtgtcggacttcgctcattacgccgacggcctcgcgggc
ggccgctccctcctggacagcgagctgctgcgctcggggctctcggggccctcggggctc
tcgggggtcctgcaggcgctggagtgccggctggacgtccaggtggtggacaccgggcga
tggctcggggtcaaaggtcagcagggcgccgccgacgtggacaactgcgtgttcgtgagc
aaacggctgctcctgcggctcgggctgttcaaccaggagtgggtgaagctgtcgaggccc
ggcggggcctccagaaccaccgggccggggctccccgacgtcaagggggccgccggcaga
cagcggctggtctccgtgctggtggtggatttaacggagaacccggaccggcagaacccg
gacctgcagaatcacgacgaagtgggcttcatatcggcaacgctgtggttcaacatgacg
gaaggagacgagatccccgtgaacggctgcacgctgaggatgaagcgctggacgccgtct
cctccggcgcccgccgccgccgctcgccactcagacagcttcagtcgctcttcttctccg
atgttcgccggcgagcttcacgtccagccggtcgcgtcgccgctctacaacaacctcggt
tgctacggcgacctgctgtccgagcacttcgcctcgcccaggctcgtttcacagggagac
gtcctgacggtccccacaggccacgcccccgacctgctggagagcaacgcagagggggtg
cacaggtgtccagtgctgtacttcagagtgcagaaggtgtgtctgtcgacggaggaagga
ggaggaggaggaggaggaggaggagaagaagaagaaggaggagaagaagaagaagctcta
ctggtggacagactgcacaccacgctctacatgcgaggccccgccggcggcccggtgccc
ggcctctccgtggggggggggcggtccctgtggagcagcctgtgtcccgcgggcctccag
accaccgtggagctcctctgcagcgccgtcagcccgcacctgcagcgcagcagctctctg
gccggctgcaccgtcctcctgcacggacccacaggaagtgggaaagtgacggcgctcaga
gcagcgacccggagactcaacctccacctgctgaaggtggactgcgtcgccgtgtgcgcc
gacacgccggcggcctcggaggcgaagctgtcgtcggcgttccggcgtgccgaggcgctg
cgtccgtgcgtcctgctgctgcgcaacctgcagctgctgctcggtcgccgcggcgacgcc
agggaggacagccgagtccacgccgcgctctgccgcctgctccgcggcgccccctgcagc
gtggtcgtcgtggcgacggtccgcaaaccccgggagctgccggcgggcgtcgcggcggcg
ttcgtccaccgggtggcgctggagagtcccaccgaggagcagcggctcgccatgctggtc
agcttgagccgagacctccagctggggagagacgtcgacctggagaggatcgccaagggc
accgcgggctttgtgttgggggatctgagcgccctgctggtggaagccggtcgagctgcc
tgcaggaggctgattcacacctgccgtgggaggctggaggaggcccggctggagggggcc
cggctggagggggcccggctggaggagacccggctggaggagacccggctggagggggcc
cggctggagggggcccggctggaggagaccctgcgctccagcggcgtggcggtcctggac
caggacttctgctccgccctgaagaccctgcaggaggcccagtcctcggccatcggggcc
cccaagatcccagacgtgcgctgggaggacatcggcgggctgcagcaggtgaagaaggag
atcctggacacggtccagctgcctctgcagcgcccggagctcctgagtctgggtctgaac
cggaccgggctcctcctgtacggacccccggggaccggcaagaccctgctggccaaggcc
gtggccaccgagtgctccatgaccttcctcagcgttaaaggtccggagctcatcaacatg
tacgtgggtcagagtgaagagaacatcagagaagtgttcagcagagcgcgctcagcggct
ccgtgcgtcgtcttcttcgatgagctggactctctggctcccagcagggggcgcagtgga
gactcagggggggtgatggacagagtcgtgtcccagctgctggccgagctcgacgctctg
ccaacgtgtgccggagtttttgtgataggagccacgaaccgtccagacctgctggaccga
tcactgctgaggcccggcaggtttgataagctggtgttcgtgggcctcagcgaggaccgg
gcctcccagctgcaggtcctcagggcgatcctccggaggctccaggtggaccccgcggtg
gacctgcagcgggtgctggagcgctgccccgatcacatgaccggcgccgacctgtacgcc
ctgtgttcggacgccatgacggccgccatcaagaggaagatcgctctcatcgaccgcggt
ctggactcggaggattctcctcttctcgtctgcgttgaggatttttcttcagcgttggaa
aacttcaagccgtcgatttcccccaaggagctgcagagatacagaaaccttcaccgggaa
ctcactgccaagtag
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