Pseudoliparis swirei (Mariana hadal snailfish): 130189700
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Entry
130189700 CDS
T09868
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L-like
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130189700
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
130189700
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
Motif
Other DBs
NCBI-GeneID:
130189700
NCBI-ProteinID:
XP_056264612
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All DBs
Position
24:complement(11711975..11722167)
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AA seq
532 aa
AA seq
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GGGEGGGGQHWAAKRLRTVEEAGGEEEDSGGEEATRSRRSRGTKVAVDDAHRIPPSPVVH
VRGLCAAVVEADLVEALDKFGNICYVMMMPFKRQALVEFDGVESAGRCVARGAREAVRVA
EQRAFFNFSTSQRISRPTSADEPGSGNKVLLLSVQNPLYPITTDVLYTVCNPVVNVQRIV
IFKRNGIQAMVEFESVEDSQRAKLALNGADIYSGCCTLKIEYARPNRLNVLRNDNSSWDY
TQPLLPQRERGKGRQRQAILGEHPSNGYGSHCPLLPLPANSRYRRRSEEVQQDMTSYPPL
HPKTSHASSSSYSSYSSFPGHTASSAVAMASGLHPAKMNCGRVFNLFCLYGNVEKVKFMK
SVPGTALVEMGHEYAVDRAVTHLHGLKVFGKKLNVCVSKQQAVIPSQVFELADGGSSYQD
FSLSRNNRFGSAQSTRNIIQPAAAVLHFYNAPPTLSEHQLHELCTERDVPAFTKFKLFDA
KPGAKTLSGLLEFDSKTEAVEALTVLNHHQIRIPNTSNPFTLKLCFSTSSHL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
ggaggaggagaaggaggaggaggacaacactgggcagccaagcggctccggacggtagag
gaggccggtggagaggaggaggactctggcggagaggaggcgacgcggagccgcaggagc
cgaggcaccaaggttgccgtggacgacgctcaccgcatcccgccgtccccggtggtccac
gtccgagggctgtgtgccgccgtggtggaggccgacctggtggaggcgctcgacaagttc
ggaaacatctgctacgtgatgatgatgcccttcaagcgccaggctctggtggagttcgac
ggcgtggagagcgcggggcgctgcgtggcgcgcggcgcccgcgaggccgtgcgcgtggcc
gagcagcgggccttcttcaacttctccaccagccagaggatcagcaggcccaccagcgcc
gacgagcccggcagcgggaacaaggttctgctgctgtccgtccagaacccgctgtacccc
atcaccaccgatgttctctacaccgtctgtaaccccgtcgttaacgtccagcgaatcgtc
atcttcaagcgcaacggcatccaggccatggtggagttcgagtcggtggaggactctcag
agggccaagctggccctgaacggggccgacatctactccggctgctgcacgctcaagatc
gagtacgctcggcccaacagactgaacgtcctccgcaacgacaacagcagctgggattac
acccaacccctcctcccgcagcgagagagaggaaaggggaggcaacggcaggccatactg
ggagaacatccatccaacggttatggctcacactgccccctgctgcctctgcccgcgaac
agcaggtacaggaggcgtagcgaggaggtgcagcaggacatgacctcctacccgccgctc
caccctaagacctcccacgcctcctcttcctcctactcctcctactcctccttcccgggc
cacaccgcctccagcgcagtcgccatggcgagcggcctccatcccgccaagatgaactgc
ggccgcgtcttcaacctcttctgtctctacggcaacgtggagaaggtgaagttcatgaag
agcgttcctggcacggcgctggtggagatggggcacgagtacgccgtggaccgggccgtg
actcacctccacggcctcaaggtgttcggcaaaaagctcaacgtctgtgtgtccaagcag
caggcggtgatccccagtcaggtgttcgagctggcggacggcggcagcagctaccaggac
ttcagtctgagcaggaacaatcgcttcggcagtgcgcagagcacgcggaacatcatccag
ccggccgccgccgtcctgcacttctacaacgccccgcccaccctgagcgagcaccagctg
cacgagctctgcaccgaacgcgacgttcccgccttcaccaagttcaagctcttcgacgcc
aaacccggcgctaagacgctgtccggtctgctggagtttgacagtaaaactgaagctgtg
gaagctctgaccgtcctgaaccaccaccagatcagaatacccaacacctccaaccccttc
accctgaaactctgcttctccacctcctcccacctgtga
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