Pseudoliparis swirei (Mariana hadal snailfish): 130189755
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Entry
130189755 CDS
T09868
Symbol
cpt1a2b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00071
Fatty acid degradation
pswi01212
Fatty acid metabolism
pswi03320
PPAR signaling pathway
pswi04148
Efferocytosis
pswi04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
130189755 (cpt1a2b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130189755 (cpt1a2b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130189755 (cpt1a2b)
03320 PPAR signaling pathway
130189755 (cpt1a2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130189755 (cpt1a2b)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
130189755 (cpt1a2b)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130189755 (cpt1a2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
130189755
NCBI-ProteinID:
XP_056264667
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Position
24:complement(8853177..8900835)
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AA seq
783 aa
AA seq
DB search
MAEAHQAVAFQFTITPEGIDLRLSYQALNQIYQSGVRSWKKRFSRLRNGVIKGVYPASPS
SWLFVVIAILATMYMRSDPSMGLIKMIQQHLPLSLHMSLSAQGQTMLSALVFSTLLWLSL
ILALRFCLKLLLSYHQWMFEQHGRVSNTTKVWVTLLRLLSSRKPLLYSYQTSLPHLPVPP
IKDTVSRYLKSARPLLTDPEFKRMTELAERFESTLGNRLQRYLKLKALWATNYVSDWWEE
YIYLRGRGPIMVNSNYYGMDFLYVTPTPIQAARAGNTITALLLYRRKVNREELKPSRVPG
TVIPLCAAQCERMFNTTRTPGVETDVLQHWQDSEFVAVYHKGRFFRLWVYTAGRLLSPRE
LEHQIQRILDDPSAPQPGEEKLGALTAGERVPWFHTREQHFSSGINKRSLDCIEKAAFFV
TLDDEEQGMRGEDPVGNLDRYAKSLLHGKCYDRWFDKSFSIIIYKNGKSGLNAEHSWADA
PTVAHLWEYTLATDAFQLGYTEDGHCKGDVDRSLPSPQRLAWEIPSEVQAQACSSLAVAQ
ALADDVDCHVFPFQEFGKGRIKKLRVSPDAFIQIGLQLAYFRDRGGFCLTYEASMTRLFR
EGRTETVRSCSNETCAFVRALESGEADDQCRRLFKLASERHQNLYRLAMTGGGIDRHLFC
LYVVSKYLGVESPFLKEVLSEPWRLSTSQTPVQQMELFDLKNHPDFISLGGGFGPVADDG
YGVSYIIVGEDMINFHVSSKHSCSETDSHRFGTQICKALQDILTLLAADAKTSSSSSQSK
KLL
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcccaccaggcggtggcgttccagttcaccatcacgccggaggggattgac
ctgcggctgtcctaccaggccctgaaccagatctaccagtccggagtgagatcctggaag
aaaagattcagccgcctgaggaacggggtgatcaagggagtgtacccggccagcccgtcc
tcctggctctttgtcgtcatagcgatcctggccaccatgtacatgcgctcggatcccagc
atggggctcatcaagatgatccagcaacacctgccactcagcctccacatgtcgctcagc
gcccaggggcagaccatgctgtcggcgctggtcttcagcaccctgctgtggctctccctc
atcctggcgctccgcttctgcctcaagctgctgctctcctaccaccagtggatgttcgag
cagcacggccgcgtgtccaacaccaccaaagtctgggtgactctgctcaggttgctctcg
agcaggaagccgctgctctacagctatcagacctcgctgccccatctgccggttcctccc
atcaaagacacagtgagccggtatctgaagtcggcgcgccctctgttgaccgatcctgag
ttcaaacgcatgactgaactggccgagcggtttgagtccaccctggggaaccggctgcag
cgctacctgaagctcaaagcgctctgggccaccaactacgtgagcgactggtgggaggaa
tacatctacctgaggggccgcggccccataatggtcaacagcaactactacggcatggac
ttcctgtatgtgaccccgaccccgatccaggcggccagggcgggcaacaccatcaccgcc
ctgctgctgtaccgccgcaaggtcaaccgggaggaactcaaaccgagtcgtgttccagga
acggtcatccccctgtgtgccgcccagtgcgagaggatgttcaacaccacgcgcacaccg
ggagtcgagactgacgtgctccagcactggcaggacagcgagtttgtggcggtgtaccac
aagggccgtttcttccgcctgtgggtgtacacggcgggccggctgctgtcgcccagggag
ctcgagcaccagatccagaggatcctggacgacccgtccgccccgcagcccggagaggag
aagctgggagcgctcactgccggagaaagggttccttggttccacacaagggagcaacac
ttcagctccggcatcaataagcgatcgctggattgcatcgagaaggcggccttcttcgtg
acgttggacgatgaagagcagggcatgcgcggcgaggacccggtcgggaacctggaccgc
tacgccaagtccctgctgcacgggaagtgttacgaccggtggttcgataagtccttctcc
atcatcatctacaagaacgggaagagcggcctgaacgctgagcactcctgggcggatgca
ccgacggtggctcacctttgggagtacaccctggccacagatgccttccagctgggctac
accgaggacggccactgcaaaggcgacgtggaccgctcgctgccttccccccagaggctg
gcctgggaaatcccctcagaggttcaggctcaggcatgcagctccctcgccgtcgcccag
gcgctggcggacgacgtggactgccacgtgtttcccttccaggagttcggaaagggacgc
atcaagaagctgcgcgtcagccccgacgcgttcatccagatcggcctgcagctggcgtac
ttcagggaccgcgggggtttctgtctgacctacgaggcgtcgatgacgcgtctcttccgg
gagggccggacggagacggtgcggtcctgctccaacgagacctgcgccttcgtcagagcg
ctggagagcggagaggcagacgaccaatgccggcgtctcttcaagctggcctccgagagg
caccagaacctgtaccgactggccatgaccgggggcgggatcgaccggcatctcttctgc
ctgtacgtggtgtccaaatacctgggagtggagtcgcccttcctcaaggaggtgctgtcg
gagccgtggcgtctctccaccagccagacgcccgtgcagcagatggagctgttcgacctg
aagaaccaccccgacttcatctcgctgggcggcggcttcggacccgttgctgacgatggt
tacggcgtgtcgtacatcatcgtgggcgaggacatgatcaacttccacgtgtcgtccaaa
cattcctgcagcgagaccgactcccaccggtttggaactcagatatgcaaagctctccaa
gacatcctgaccctcctcgccgccgacgccaaaacctcctcctcctcctcccagtccaag
aagctcctctga
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