KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130189821
Entry
130189821         CDS       T09868                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pswi03041]
    130189821
Spliceosome [BR:pswi03041]
 Complex B
  Other components
   Complex B specific factors
    130189821
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd LisH_TPL NBCH_WD40 WDR90_beta-prop_4th Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_DCAF4 Ge1_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_RSE1_1st Beta-prop_VPS8 Mala_s_1-like Beta-prop_IFT80_2nd Beta-prop_IP5PC_F VPS8_N LisH WDR54 Beta-prop_WDR11_2nd DUF7165 Phytase
Other DBs
NCBI-GeneID: 130189821
NCBI-ProteinID: XP_056264741
LinkDB
Position
24:complement(11397563..11406746)
AA seq 511 aa
MATEMEPSDVIRLIMQYLKENNLYRTLSTLQEETTVSLNTVESIDSFITDIKSGHWDSVL
LAIESLKLPDNTLIDLYEQVVMELIEMREVGAAHSLLRQTDPMIMLKQTQPERYIHLDNL
LTCSYFDPCEAYPKGSSKEKRRRAIAEALVREVSMVLPSRLTGLLEQVGSMRIQPYADHL
PPDTTVDTTVHMDRQVEKESFPTQLYRQIKFGRRLHVECARFSPDGKYLITGSVDGFIEV
WNFNTGKISKDLKYQAQDSFMMMDDAVMCMCFSQDTDLLATGAQNGKMKVWKVQSGLCLR
RFEHGHNKGVTCLSFSKDNTQILSASFNQTIRIHELRSGKTLKELNSHSSFVSDAFFTED
GSHIISASSDGTVEIWNTTSCQCIHTFKSLSRASDDPVNNVIPLPQNQEHFVICNHSSTV
VVMDMNGQMVKSFSSERKEKANFVCCTLSPHGEWIYCVGEDLVLYCFNYTTGRLQKTLTV
HEKDVIGIAHHPHENLLATYSEDGLLRLWKP
NT seq 1536 nt   +upstreamnt  +downstreamnt
atggctacggagatggaaccctcggatgtgatacgcctcataatgcagtacctcaaggag
aacaacctctaccgaacactgagcaccttacaggaggaaacaactgtatcgctgaacaca
gtggaaagcatcgacagcttcatcactgatataaagagcggccactgggactccgtcctg
ctggctatcgagtccctcaagttgcccgacaacacgctcattgatctttatgagcaggtt
gtaatggagctcattgaaatgagggaggttggagccgctcactcactcctcaggcaaact
gacccgatgatcatgcttaagcagactcagccagagaggtacatccatttggataacctg
ctaacatgctcctactttgacccctgtgaggcgtacccgaaaggcagcagcaaggagaag
cggcgcagggcgatagccgaggcgttggtgagggaggtcagcatggtgctgccttctcgt
ctcacggggctcctggaacaagtcggttctatgagaatacaaccgtatgcagatcatctc
ccccccgacacgaccgtggacacaactgtccacatggacagacaagtggagaaggagagc
tttccaacacagctgtaccgccaaatcaagtttgggcggcggttacatgtcgagtgtgcc
cgtttctctcctgatggcaaatacttaatcactgggtcggtggatgggttcattgaagtc
tggaactttaacactggaaaaattagtaaggatttaaagtaccaggcccaagacagtttc
atgatgatggatgatgctgtgatgtgtatgtgcttcagtcaagatacagatctactggca
actggagctcagaatggcaaaatgaaggtgtggaaggttcagagtggcttgtgtctgcgc
aggttcgagcacggccacaacaaaggtgtgacctgtctgagcttctccaaggacaacacc
cagatcctcagtgcctccttcaaccagacaatcagaattcatgaactgagatcaggcaag
acactgaaggagttaaacagccattcgtcattcgtaagtgatgcatttttcaccgaagat
ggatcccacatcatcagtgcctcatctgatggcacagtcgagatttggaatacaacatcc
tgccagtgcatccacacgttcaagtctctgtcccgggcctcagacgaccccgtgaacaat
gtgattcctcttccccaaaatcaagagcactttgtgatttgtaatcactccagcacggtg
gtcgtcatggacatgaacggacagatggtgaagagcttcagctcagaaagaaaagaaaag
gccaattttgtctgctgcaccctgtcaccccatggggagtggatttactgtgtgggagag
gacttagtgctgtattgcttcaactatacgacgggaagactgcagaaaacactgaccgtt
cacgagaaagatgtaattggtatcgcacaccacccacatgagaatctgcttgccacgtac
agcgaggacggccttctgaggctatggaaaccttaa

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