Pseudoliparis swirei (Mariana hadal snailfish): 130189852
Help
Entry
130189852 CDS
T09868
Symbol
rhot1b
Name
(RefSeq) mitochondrial Rho GTPase 1b isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130189852 (rhot1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130189852 (rhot1b)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pswi04031
]
130189852 (rhot1b)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
130189852 (rhot1b)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
130189852 (rhot1b)
GTP-binding proteins [BR:
pswi04031
]
Small (monomeric) G-proteins
Rho Family
Miro
130189852 (rhot1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
RsgA_GTPase
Arf
EF-hand_7
MMR_HSR1
EF-hand_1
AAA
EF-hand_8
FeoB_N
AAA_5
AAA_25
Motif
Other DBs
NCBI-GeneID:
130189852
NCBI-ProteinID:
XP_056264802
LinkDB
All DBs
Position
24:18544515..18556916
Genome browser
AA seq
667 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPKVVPYRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLFQEISKANVICIVYSVNSKTSIEKVTSHWIPLITENTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNRYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPERRD
MKSLCVKALTRIFKVSDLDNDGILNDNELNFFQRTCFNTPLESQALEDVKNVVRKNLSDG
VCDNGLTLTGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELNQDYLFPPLKLPPDCTTE
LNHNAYLFLQSIFDKHDKDRDCALSPEETRDLFDVFPYMPWGPDVNNTVCTNDQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIIAEHESQASGITVTRDKKIDLQKKQTQRSVFR
CNVFGDIGSGKSGFLQAFLGRNHMRQKTIREEHRSYYAISTTYVYGQEKYLLLHEVFPDF
DSLSEADLACDIVCLFYDVSNPYSFEYCATVFKQYFMDSKVPCMMIAAKSDLPEIKQMYG
CSPLEFCRRHKMPPPQSFTCNTAAAPSRDIYTKLTTMAMYPHARLRCMCTCNRCAFCLCQ
NFLNSELLQTVRAKLYAVVLRRSFLPFFNRLSASHQPHDRSSSPPQLVAFIPLISFIFLE
SRCIFKN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggacgtgcggatattattggtgggagagcccaaagtggggaagacctctctc
atcatgtcgctggtcagcgaggagttcccgaaagtggttccctaccgcgctgaggaaatc
accatccctgcagacgtcacaccagagagggttcccacacacatcgtggactactcggag
gcagagcagaccgatgagcagttgtttcaggagatctccaaggcgaatgtgatttgcatc
gtctactctgtcaacagcaagacgtccattgaaaaggtgacgagccactggatccccctc
attactgagaacacggacaaggacagcagggttcctctgattctggtgggcaacaagtcg
gacctggtggaacacagcagcatggagaccatcctgcccatcatgaaccgttacagtgag
atagagacttgcgtcgagtgctcagcaaagaacctgaagaacatctcggagctgttctac
tatgcccaaaaggcggtgctgcaccccacaggtcctctttactgtccagagagaagagac
atgaagtccctttgtgtcaaagccctgactcgaatcttcaaagtgtctgacctggacaat
gatgggattctcaacgataatgagctcaatttcttccagcggacgtgcttcaacacccca
ctagagtctcaggcgctggaggacgtcaaaaatgtggtgaggaagaatttgagcgacgga
gtgtgtgacaacggactcactctgacgggcttcctgttcctccacaccctgttcatccag
cggggtcgccatgagacaacgtggacggtgctgaggaggtttgggtacgacgatgacctg
gagttaaatcaggactacctcttccctccgttgaagctccctccagactgcaccacagag
ctcaaccacaacgcctacctcttcctccagagcatctttgacaaacatgacaaggaccgt
gactgtgccttgtcaccagaagagacgagggacttgtttgatgtgtttccctacatgccc
tggggtccagatgtcaataatacagtttgcactaatgaccagggctggatcacctaccag
ggatatctctcccagtggacgttaacaacatatctggatgtccagcgatgcctggagtat
ttgggttacctcggttactcaataattgcagagcacgagtcccaagcatcagggatcaca
gtgaccagagataagaagattgacctgcagaagaagcagacgcagcgcagcgtcttccgc
tgtaatgtctttggagacattggcagcggcaagagcggcttcctgcaagcgttcctgggt
agaaaccacatgcgccaaaaaacgatccgagaggaacacagatcctactacgccatcagc
accacctacgtttacggccaggagaaataccttcttcttcatgaagtgttccctgacttc
gactccctgtctgaggccgatctggcctgtgacatcgtctgcctgttctacgatgtcagc
aacccttactccttcgagtactgcgccacggtcttcaagcaatacttcatggacagcaag
gtaccatgcatgatgatcgcggcgaagtcggacctgccggagatcaaacagatgtacggc
tgcagtcctctggagttctgcaggaggcacaagatgccacctccccagtccttcacctgt
aacactgcagcagcgcccagcagagacatctacaccaagctgaccactatggccatgtac
ccccacgcccggttgcgctgcatgtgcacttgtaaccggtgcgccttctgcttgtgtcag
aacttcctcaactctgagctgctgcagacggtcagggccaaactctacgctgttgtactc
agaaggtccttcttgccttttttcaaccgtctctctgcatcccatcagcctcatgatcgg
tcgtcatcgccgcctcagcttgtcgcgttcattcccctcatttcttttatttttttggaa
agtcgttgtatttttaagaattag
DBGET
integrated database retrieval system
