Pseudoliparis swirei (Mariana hadal snailfish): 130189853
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Entry
130189853 CDS
T09868
Symbol
rab11fip4b
Name
(RefSeq) rab11 family-interacting protein 4B isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130189853 (rab11fip4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130189853 (rab11fip4b)
Membrane trafficking [BR:
pswi04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
130189853 (rab11fip4b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_9
Flagellin_C
EF-hand_6
ubiquitin
Motif
Other DBs
NCBI-GeneID:
130189853
NCBI-ProteinID:
XP_056264809
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Position
24:18382825..18439806
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AA seq
660 aa
AA seq
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MEGDFPPERLLTSVRRLKEVFDACDSDSVGFIRPEHFEQLGSQFGHADQVKKLSSCLDPD
SHGRVNFKDFCRGVLTMKGYVGILQKKTGARFITASNETAKSFYQGVEEEQLCLAIMCTR
AFPDLVPENQLLPGEVAEPEGEVADEGRERESDRDSAVESTQGSDTSDGPIRPGDKEDAL
GHLFFPGEKCGQTSVSVTSDLSSASLNEEQFEDYGEGEEPDYAPSSPSPDDETRTNGCSD
LGSSVPSSAGQTPRKVRHHYNGEVMDVYCSQCSKKVNLLNDLEVRLKNLKTNSPIRKITS
NAFGRQLLHNSNLSSSNGSTEDLFRDSIDSCDININEKVSSLEKKVADLESEILMNGDIK
SRLKLENTQIVHRVHELEEQLKDQETRAEQSLHEELRRHRESYSKMERDKNMQIELLSNR
VKQVEEENSEMGLSMSRLKSQSEKLDEEKQRMTDKLEDTSLRLRDEMDLYKKMMDKLRQN
RQQFQKEKEAMQELIEDLRRELEHLQLFKLEAERPGRGHGSFSGLADFNNRTREVELEHE
VKRLKQRLASQDFLPHELQHLVLSGARLRPGLMESQKLREQNDELNGQILSLSLYEAKTL
FATQTKAQSLAAEIENASRDQLMEALKEQEEINIRLRQYMDKIILSILDHNPSILEIKGE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacttccctcctgagcgtctgctgacctcggtgaggaggctcaaagaggtg
ttcgacgcctgtgactcggactcggtcgggtttatccgccctgaacacttcgagcagttg
ggttctcagttcggacacgcagaccaggtgaagaaattgtccagctgtctggaccccgac
tctcacgggagggtgaacttcaaagacttctgccgcggtgtgctcaccatgaaaggttat
gttggaatcttacaaaagaaaaccggggcacggttcatcacagcctcaaatgagacagct
aagagtttctatcagggcgttgaggaggagcagctctgtctggccatcatgtgcacgcgg
gcctttcctgacctcgtccctgagaaccagctgttaccgggagaggtggcggagcctgag
ggggaggtggcagacgagggcagggagagggaatcggacagagacagtgcagtggaaagc
acccaagggtcagacacctccgacgggccgatcagacctggagacaaggaagacgcactg
ggtcatctcttcttccctggggagaagtgtggtcagaccagcgtctcagtgacctctgac
ctttcctcggcctctctgaacgaggagcagtttgaggactacggcgaaggggaggaaccg
gactacgctcccagcagccccagcccagacgacgagactcgaaccaacgggtgctccgac
ctcggctcatctgttccctctagcgcgggccagactcctcgtaaggtgcgtcatcattac
aacggggaagtgatggacgtctactgctctcaatgcagcaagaaggtcaacctgctgaac
gacctggaggttcgcctcaaaaacctcaagactaacagccctatcaggaaaatcaccagc
aatgctttcggcaggcagctgcttcacaacagcaacttgagcagcagtaacggcagcacg
gaagaccttttcagagacagcatcgactcctgtgacatcaacatcaacgagaaggtgagc
tctctggagaagaaggtggcagatctggagagcgagatcctgatgaacggagatatcaag
tccaggctgaagctggagaacacgcaaatagtccacagggtccatgagcttgaggagcag
ctgaaagaccaggagacgcgagcagaacaaagtctgcatgaggagctgaggcgacaccga
gagtcctacagcaagatggagagggacaagaacatgcagatagagctgctgagcaaccga
gtgaagcaggtggaggaggagaacagtgagatgggtctgagcatgagccggctcaaatca
cagtcggagaaactggatgaggagaagcaaaggatgacagacaagctggaggacaccagt
ctgcgcctgagggacgagatggacctctacaagaaaatgatggacaagctgagacagaac
agacaacagttccagaaggaaaaagaagccatgcaggagcttattgaggacctgcgtcgc
gagctggagcatttgcaactcttcaagctggaggcggagagacccggccgcggtcacggc
tctttctctgggctggcggacttcaacaacaggacccgggaggtggagctagagcacgag
gtcaagaggctcaagcagcgattagcgtcccaggactttctcccccatgaactccagcac
ctggtgttgtctggggctcggctccgccctggtctgatggagagccagaagctgagggag
cagaacgatgagctcaacggtcagatcctcagcctcagtttgtacgaagccaaaacgctg
ttcgccacgcagaccaaggcccagtccctcgctgccgagatagagaacgcctccagagac
cagttgatggaggccctgaaggagcaggaggaaatcaacatacgcctgcgacagtacatg
gacaaaatcatcctgtccatcctggaccacaacccctccatcctggagatcaagggcgaa
tag
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