Pseudoliparis swirei (Mariana hadal snailfish): 130189933
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Entry
130189933 CDS
T09868
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_3
zf-CCHC
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
130189933
NCBI-ProteinID:
XP_056264936
LinkDB
All DBs
Position
24:5150260..5167496
Genome browser
AA seq
2067 aa
AA seq
DB search
MSCVHYKFSSKLDYNTVTFDGLHITLNELKKQIMGRERLKATDCDLQITNAQTREEYTDD
EIHIPKHSSVIVRRTPLGGVKPAGRTFIVDRSDTAVVGSSRPTDSSPSMSLAQLAKTANL
VDANASEEDKIKAMISQSNHEYDPIHYSKKAVGPPPAHYTCFRCGKAGHYIRQCPLLMIQ
DKSVESPKPVRISKGIPQSFMVKAEPGTKGAMLTSTGEYAIPAIDAEAYAQGKKERPPFV
PHDQSSSEDETDPIPDELLCPICNDLMTDAVVIPCCGNSYCDECIRTALLDSEEHTCFTC
KQSDVSPDNLIANKFLRQAVNNFKNETGYTKHARKQLQNAAPPPPRPQLVRHSRQQDPLL
ANITHPPPTIAPATAPQVQVPPPDPAPAPTSAPVPSAPVAASAPTPPHAAAVEEREDSPA
PPPVVDRHSPVHSAGHGDPPPTGDPEPNVTPDSSGTSNYHVSPFGHPPPIRPPHPPGHQS
RPHHVHRGGVDGRPWERFFRGRGDHPSAHLQPPPPALIPPVYPAPSMYPPPPQSYPPPYN
SGPGLHPPVIGYQPQTVYAPGPLGLNPPWVAPGTQPPLIPLTPLGQPPLSKEDFYRQRHH
RQDTVTSKLDEFTKDFHKELMKYRNAPKRRRPSYSRSRSYSRSPFSRSPYSRSRSRSRSY
SYSPSRSRSRSHGRSYPRSPYSRRNGRSYGRSRSRSRSRSYGYRRSGSPRSPHPYRPGGW
EGAEGAGPYRSRSRSPGSGPVPGPGTGPGPGPGPGPGPGPGHGPGPGPGPGGFRPRSPGQ
RKPPPRELPPYQLKGPSPGGNDRWERERYRQWEKEYADWYNQFYKDYDNQHPSLHHRGRG
SRDRERDRMSPLSRNYSPQGRGRRGREREERGAPPNHPPSSSSSGTKSSAKLLKTKKVKK
RRTGDDSEASHQSVDRGDATPVRDEPMDEIPSLVKTPPMSSKASVGSATSKAPASKSSAA
PVKPSTKSTSKTSSDRTKKDKGQKVKAKVKTESVKVKSDKGKKKPGDCVVVKKESSSSSS
SGTKPLKTVKTKPEDPPDSISKKEKEKGKSSAVRPGLLKTPPLSCQSLSMHHPSLHDGPR
QGHDIRGRRDLPQSGGLLPTPHQHTLLHRPLSPERRRMGEEGRSLLGAPPGKLRRIDGLG
VGDDVISHSHLSHQLPLHRLPPPSDRPGLLPLPVSRDMGRVDADRGSIRPLMDLQVKPLT
QRRIKLNRDLGRKGSTESAATDRVPSGSEKTTSTSDRSAAANLSEGDRPSSTAEGAVRKE
RSASAERGVGRERPGSAGERLQSSEQSRSSGPDRERDRASGSDRGMTSSDRGMTSSDRGM
TSSDRGATSSDRGATSSDRGATSSDRGATSSDRVATSSDRGTTSSDKGATSSDRGTTSSD
RGTTSSDKGATSSDRGTTSSDRGTTSTSSDRGMTSTSSDRSMTSSDRGMTSTSSDRGMTS
SDRGMTSSDRGMTSSDRGMTSSDRGMTSTSSDRGMTSSDRGMTSSDRGMASSDRGMTSSD
RGMASSDRGMTSSDRGMTSSDRGMTSSDRGMTSSDRGMTSTSSDRGMTSSDRGMTSTSSD
RGMTSSDRGMTSTSSDRGVTSVSSDRDRVSSSHKIAVTVERDFEGERLVRTERKSSSAGG
RSVSLDKMTIAEKTSVSRSPADPQEKPSISSKERGEGSERSAKSDRSVSKDRTERSVPSE
KPAASHRDAVKDAEETVVKSKPRISRKALTSHTVSSTRSSQETKRDSDKDQKSASSKPAE
QLPSSPVNSRGRSPSVSPEPAAAIEEPLIQPPPRSKWEREDDEEGQENGLAAPKEPSPVP
QRVRGREGPTEAPKPVRGEARDAPREERRGAVREERKGKAPREEGKGGRTAQTASDKPTK
IKLVREEGRGGRDEGRAAAREEGRGGGRDEGRAAAAATTATTTTPAAKEERAAEGRGGRE
ESRGLEPRRQRLCSDLGRETDEAAFVPDYSEGEGSETERGRSGSRSLSGSQPSSPSQSNN
SGSAAATTTTATAADKKKKKHKKHKKHKKHKKHSGQVKEGEQKEHKHKHKKKKHKKSKDK
DAEEEVEEEVEEEEEKMTEKAEEGAPQ
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgttcactataagttctcttccaaactggactacaacactgtcactttcgat
gggctgcacatcaccctcaacgagcttaaaaagcagattatgggccgagagcgcctcaag
gccacagactgcgacctgcagatcaccaatgcgcagactcgagaagaatacaccgatgat
gaaatccacatcccgaaacactcgtctgtgatcgtccgccgcactccacttggtggcgta
aaacctgctggcaggacgttcattgtagatcgttctgacacagctgtggtgggatcttct
agacccactgactcttctccatctatgtcactcgcccaactcgccaagactgctaacctt
gttgatgctaatgcatcagaagaggacaagattaaagccatgatatctcagtccaatcat
gaatatgacccaatacattactccaagaaggcagtaggaccgcctcctgctcactatacc
tgctttcgttgtggaaaggctggtcactacattcgacaatgccccttgctgatgatccag
gataagagtgtggagagtcccaagccagtgaggattagtaagggcattcctcagagcttc
atggtgaaggcagagcctggcaccaaaggagccatgttaaccagcactggagaatatgcc
atacctgctatagatgcggaggcgtatgcacaagggaagaaggagcgccctccttttgtt
ccacacgaccagtcgtcatctgaggacgagacggacccaatccccgatgaactcctgtgt
ccgatttgcaatgacctgatgacggacgccgtggttataccctgctgtggaaacagttac
tgcgatgagtgtataaggactgccttgttggactcggaggagcacacctgcttcacatgc
aaacagtccgatgtttcacctgataatctcatcgccaacaagtttcttcgacaggctgtg
aacaactttaaaaatgagacgggatacaccaaacatgctcgcaagcagttacaaaatgca
gccccgccgccaccgcgcccgcagctggtcaggcactcaagacagcaggacccactgctg
gccaacatcacgcaccctcctcctacaatcgcacccgcgactgcccctcaagtacaggtc
ccgccccctgatcctgctcctgcaccgacatcggctcctgtgccttctgcgcctgtcgct
gcttccgctcctacccctcctcacgctgctgctgttgaagaacgagaagattcaccagcc
cctcctcctgttgttgaccgccactcccctgtgcactctgccggccatggggatccaccc
ccaacgggtgatccagaacctaatgtgacaccggactcttcgggaacctcaaactaccat
gtatctccttttggccacccaccacctataagaccgcctcatccaccaggtcatcagtca
cgaccacaccacgttcacagaggaggcgtcgatggcagaccctgggagagatttttcaga
ggaagaggagaccacccctccgctcacctccagccacctccacctgcacttatccctccg
gtgtacccagctccgtccatgtacccgcccccgccccagtcctacccccctccgtacaac
tctggcccaggccttcaccctcccgtcattggataccagccgcagaccgtttatgctcct
ggaccactggggctcaacccgccctgggtagcccctggtacccagccccctcttatccct
ttaaccccccttggtcaaccccccctctcaaaagaagatttctacagacagcggcaccac
cgacaggacacagttacatccaaactggatgaatttactaaagacttccacaaagagctg
atgaaatacagaaatgcaccaaagagacgaagaccatcgtattcaagatcccggtcctac
agccgctctccattcagccgctctccttactctcgctcgagatcaagatccaggtcttac
tcttattctcccagtcgatcccgttcacgctcccatggccggtcttatccccgctcgcct
tattctagacgcaatgggcgcagctacggacgatcacggtcccgttcccggtcaaggtct
tatgggtaccgtcgttctggctcaccgcggtctcctcatccctaccggccaggaggctgg
gagggagcagaaggagcaggaccctacaggtcacggtctcgctcccctggctccggcccc
gttccaggccctggaactggtcctggacctggtcctggacccggtcctggtcctggccct
ggccacggccctggccccggccctggacccggtggcttccgtccccgcagccctggtcaa
agaaagccgcctcctcgggagctcccaccgtatcaactgaagggtcctagtcctggaggc
aatgaccgctgggaaagagaaaggtatcggcagtgggagaaggagtatgcagactggtac
aaccagttctacaaagactacgacaaccagcacccctcactgcatcacagaggtcgtggt
agcagagacagggagagggacagaatgtcccctttatccagaaattactccccccagggg
agaggaagaagaggaagagaaagagaagagaggggtgctccccctaaccatccgccatcc
tcttcctcatcagggacgaagtccagcgctaaactcctgaagacaaagaaagtaaaaaag
aggaggactggggacgactcagaggcatcgcatcagtcggtcgacagaggtgatgcgact
cccgtcagagacgaaccaatggacgagatcccgtcacttgttaagacgcctcccatgtcc
tcaaaggcttcggtcggatctgcaacctcgaaagctccagcttctaaaagctctgctgca
cccgttaaaccctcaaccaagtccacgtcgaagacttcgtctgataggactaagaaagac
aagggccaaaaggtcaaagctaaagtgaagacggagagcgtgaaggtgaagagtgacaag
gggaagaaaaagcccggagactgtgtggtggtcaaaaaagagtcctcgtcctcttcctcc
tctggcacgaaaccgctaaagaccgttaaaaccaaaccggaagacccccccgactctatc
tctaaaaaggaaaaggaaaagggtaaaagctctgcagtgaggccaggcctgctgaagact
cctccgctgtcctgccagagcctgtctatgcatcatccctctcttcatgatggccctcga
cagggccatgacatccgggggagaagagatcttccgcagagtggtggtctcctgcccacc
ccccatcaacacacactcctccacagacctctctcccctgagaggaggaggatgggagaa
gagggccgctctttactcggagcccctcccggaaagctgaggagaatagacgggctcggc
gtcggagatgatgtcatctcccactctcacttgtctcatcagctcccgctccacagactc
ccacctccttcagacaggccgggtcttcttcccttaccagtgagccgtgatatgggccgg
gtagacgcagaccgaggctccatcagacctctaatggacctccaggtgaagccactgacc
cagaggaggatcaagttaaacagagacctggggaggaagggcagcaccgagagcgcagcc
acagacagggtaccgtctggttctgagaagacgacctctacctcggaccgatcagcggcg
gctaacctctctgaaggagaccggcccagcagtacagcagaaggtgctgttagaaaggag
cggtcggcatctgcagagaggggagtcggcagagagagaccgggaagtgctggagagaga
ctacagagttcagagcagagtagaagctcaggaccggacagagagcgagacagagcttca
ggatctgacaggggcatgacgtcatctgacaggggcatgacgtcatctgacaggggcatg
acgtcatctgacaggggcgcgacgtcatctgacaggggcgcgacgtcatctgacagggga
gcgacgtcatctgacaggggcgcgacgtcatctgacagggtcgcgacgtcatctgacaga
ggaacgacatcatctgacaagggcgcgacgtcatctgacaggggcacaacgtcatctgac
agaggaacgacatcatctgacaagggcgcgacgtcatctgacaggggcacaacgtcgtcc
gacagaggcacaacgtcaacctcgtcagacaggggaatgacatcaacgtcgtctgacagg
agcatgacgtcatctgacagaggcatgacatcaacgtcgtctgacagaggcatgacgtcg
tctgacagaggcatgacgtcgtctgacagaggcatgacgtcgtctgacagaggcatgacg
tcgtctgacagaggcatgacatcaacgtcgtctgacagaggaatgacgtcgtctgacaga
ggcatgacgtcgtctgacagaggcatggcgtcgtctgacagaggcatgacgtcgtctgac
agaggcatggcgtcgtctgacagaggaatgacgtcgtctgacagaggcatgacgtcgtct
gacagaggaatgacgtcgtctgacagaggcatgacgtcgtctgacagaggcatgacatca
acgtcgtctgacagaggaatgacgtcgtctgacagaggcatgacatcgacgtcgtctgac
agaggaatgacgtcgtctgacagaggcatgacgtcgacgtcgtccgacaggggcgtgacg
tcggtgtcgtctgacagggatagggtctccagctcacataaaatagcagttacagtggag
agagacttcgaaggagaacggttggtgaggacggagcgaaagtcctccagtgcgggaggg
agatctgtctctctggataaaatgaccatcgcagagaagacatccgtctctcggagcccg
gccgaccctcaggagaagccaagcatatcgtctaaggagaggggcgaagggtcagaacgc
tctgctaaatctgacaggagtgtgtccaaggacagaacagagaggagtgtcccctcagag
aaaccagctgcttctcacagagacgcagtgaaagatgctgaggagaccgttgtgaagagc
aaacccaggatcagccgaaaggccctgaccagccacactgtgagctccaccaggtcatct
caagaaacaaagcgagactcggacaaagatcaaaagagcgcgtcctccaaaccggccgag
cagctcccgtcgagccccgtgaacagccgcggccgcagcccgagcgtcagcccggagccc
gcggcggccatcgaggagccgctcattcagccgccgcctcgctccaagtgggagagggag
gatgacgaagaaggccaagagaacggacttgctgcgcccaaagagccgtcaccggtgcca
cagagggtccggggcagagaagggccgacggaggccccgaaacctgtgaggggcgaagcc
cgggatgctccaagggaagagaggcgaggcgcagtgagagaggagaggaaagggaaagca
ccaagggaagagggcaaaggtggcaggacggcccagaccgcctcggacaaaccaaccaag
ataaaactcgttagggaggaggggagaggaggtcgagacgaaggcagagctgcggccaga
gaggaggggagaggcggaggaagagacgaggggcgagcggcggcggcggcgacgacggcg
acgacgacgacgccggcggcgaaggaggagagagccgccgaaggcagaggagggcgagag
gagagccgcggcctcgagccccggaggcagcgcctgtgctccgacctcggccgcgagacg
gacgaggcggccttcgtgcccgactacagcgaaggcgaaggctccgagacggagaggggg
cggagcggcagccgcagtctgtcgggcagccagccctccagcccctcccagagcaacaac
agcggctcggcggccgccaccaccaccaccgccaccgcggcggacaagaagaagaagaaa
cacaagaagcacaagaagcacaagaagcacaagaagcacagcggccaggtcaaggaaggg
gaacagaaggagcacaagcacaaacacaagaagaagaaacacaaaaaaagcaaagacaaa
gacgcggaggaggaagtggaggaggaagtggaggaggaggaggagaagatgacggagaag
gcagaggaaggggctccacagtaa
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integrated database retrieval system
