KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130189945
Entry
130189945         CDS       T09868                                 
Symbol
ubb
Name
(RefSeq) polyubiquitin-B isoform X1
  KO
K08770  ubiquitin B/C
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04120  Ubiquitin mediated proteolysis
pswi04137  Mitophagy - animal
pswi04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130189945 (ubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    130189945 (ubb)
   04137 Mitophagy - animal
    130189945 (ubb)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    130189945 (ubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pswi04121]
    130189945 (ubb)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pswi04147]
    130189945 (ubb)
Ubiquitin system [BR:pswi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   130189945 (ubb)
Exosome [BR:pswi04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   130189945 (ubb)
  Exosomal proteins of other body fluids (saliva and urine)
   130189945 (ubb)
  Exosomal proteins of colorectal cancer cells
   130189945 (ubb)
  Exosomal proteins of bladder cancer cells
   130189945 (ubb)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 130189945
NCBI-ProteinID: XP_056264961
LinkDB
Position
3:complement(12223281..12230135)
AA seq 229 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatctttgtcaagaccctcaccggcaagaccatcaccctcgaggtcgagcctagc
gacaccatcgagaatgtgaaggccaagatccaggataaggaaggcatccccccagatcag
cagaggctgatcttcgccggcaagcagctggaagatggccgcaccctgtctgactacaac
atccagaaggagtccaccctccatcttgtcctgcgtctgagaggaggcatgcagatcttc
gtcaagaccctcaccggcaagaccatcaccctggaggtcgagcccagcgacaccatcgag
aacgtcaaggccaagatccaggataaggaaggcatccccccagatcagcagaggctgatc
ttcgccggcaagcaactggaagatggccgcaccctgtctgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgagaggaggcatgcagatcttcgtcaagaccctc
accggcaagaccatcaccctggaggtcgagcctagcgacaccatcgagaacgtcaaggcc
aagatccaggataaggaaggcatccccccagatcagcagaggctgatcttcgccggcaag
cagctggaagatggccgcaccctgtctgactacaacatccagaaggagtccaccctccat
cttgtcctgcgtctgaggggaggtcaataa

DBGET integrated database retrieval system