Pseudoliparis swirei (Mariana hadal snailfish): 130189954
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Entry
130189954 CDS
T09868
Symbol
usp53b
Name
(RefSeq) LOW QUALITY PROTEIN: inactive ubiquitin carboxyl-terminal hydrolase 53
KO
K27919
inactive ubiquitin carboxyl-terminal hydrolase 53
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130189954 (usp53b)
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130189954 (usp53b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
130189954
NCBI-ProteinID:
XP_056264966
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All DBs
Position
24:complement(11135119..11163718)
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AA seq
1043 aa
AA seq
DB search
MKWTEPMARPVHKLQPPSMSSPSKSPPXSGEAAGSNSMAWVKMFKKPGGGLKKSYQPGSM
LSLALTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSLRQLSGHFCLGDACIFCALKSIFS
QFQQSRERVLPSDSLRNALAETFKDEQRFQLGLMDDAAECFENILERIHLHIVSDTATDA
CSSKSCITHQKFAMMLYEQFVCRCCGASSDPHPFTEFVHYVSTTALCQQVDHMLGKNERL
RSDMLGELLQAANNTGDQRSCPSNCGQSIKIRRVLMNCPEIVTIGFVWDAEQSDLTDDVI
RSLGPRLNLCGLFNRVTDENATRSELHLVGMICFSSKHYSAFAYHTKSSKWMFFDDATVK
EIGSKWKDVASKCVRGHYQPLLLFYTNPEGSPVSNEDAPRQTTMCPPRYKAQLNGDVTVK
LPLGSPNKYQEPFMENLQRPSETSKKDQGHRKMDLSQQKEMTHARSSSPPENGPRTPVDQ
KCKTYPRTXKSSNHSSRGSQKPRGQFFSTQGGGHSRRTNTSPSRPDQDSCHEQWEKSVND
GSRNKSKSTWRPIREVLNVDTVLNDLEQRRQQQHESPRHSKPSSQERVHTEQSRDGEQED
VRTRDDRKQKCLMTIYEEEQRHKTESHSSVESESRANQRDSRLKGGPKTLLQSDTWTIQR
TESGYESSDRLSSGSTNPDSPGIDSFVVKDQQSTPEAQLQSQLQQKGGNDKSSIMSSPPH
NGKHQPKPQGRNHDQVSHSHLKCSPTARWKSKYTSSTSRKAVSSERESTGSDNKSSEQTT
CRGHAGESPALRHITKNSRSEWNSADDLALSEPEDRENPGASEFQCPHIVLPYHSPSNVT
MEPLQLNNQRQLGTPGSPQLRPTQRIAPCQGEESHTVFLPRMLQEPFPLSPCLSTSIFYV
SPHRRPDIKGLRTFSDASSKSGSDPERSIPSSCEIEERLQNGCRVEQAVPAQGVSLTTYF
TVDNCMTETYRLKYHNQRPLVLPAMVPWTMVVTERRDTGHTLPTDTYSQDVPKARPETSH
NSNKSTAKWNPVTAKGLDERVFL
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggacggagcccatggccagacctgtgcacaaactccaacctcccagcatgtcc
agccccagcaagtctcccccantctctggagaagctgcaggctctaactccatggcatgg
gtgaagatgttcaaaaaacctggtggaggcctgaagaagtcctaccagcctgggagcatg
ctgtctctcgcgctcaccaaaggcctcctgaatgagcccgggcaaaatagttgcttccta
aacagcgctgttcaggtgctttggcagctggacatcttcaggagaagtctgaggcagctc
tcaggtcacttctgtctcggtgatgcctgcattttctgtgctttgaagagcatcttcagc
cagtttcagcagagcagagagcgcgtgctcccctccgacagcctgcgtaacgcccttgct
gaaacctttaaggatgagcaacgcttccaacttggcctgatggatgatgctgctgagtgc
tttgagaacatccttgagcgaattcacttacatatagtttcggacactgcgacagacgca
tgttcatccaaatcctgcatcacccatcagaagtttgcaatgatgctttatgagcagttt
gtgtgtcgctgctgtggtgcatcttcagacccacatccattcacagaattcgtacattat
gtctcaaccacagctttatgccaacaggtcgatcacatgttgggaaagaacgaacggctc
agatcagacatgcttggagaattgttgcaggcagcaaacaacacaggtgaccaacgaagc
tgcccgagcaactgcggtcaaagtatcaagatccgtcgggtgctcatgaactgtccagag
attgtcactattggatttgtatgggatgctgagcagtccgatctcacggacgatgtcatt
cggtcacttggcccacgtttgaacctgtgtgggctttttaatcgtgtcacagatgaaaat
gccacacggagtgagcttcatctggtggggatgatctgtttttcgagcaaacactactca
gcctttgcctatcacactaaatcttcaaaatggatgtttttcgatgatgctactgtaaag
gagattggatccaaatggaaagatgttgcctctaaatgtgttaggggacattaccagcca
cttcttttattttacaccaatccagagggatctccagtctctaatgaagacgcaccgaga
caaaccaccatgtgtcctcctcggtacaaagcccaactgaatggggatgtgacagtgaaa
cttcccctcggcagtcctaacaaataccaggaacctttcatggagaatttgcagaggcca
agtgaaacatcaaaaaaggatcaagggcatcggaaaatggacttatcacaacagaaagaa
atgacacatgcaagatcttcatctcctccagagaatggaccgaggactcctgtggaccaa
aaatgtaaaacctatccgcgcactnngaagtcatcaaaccattcaagcagaggatctcag
aagccacgtgggcagttcttcagtacgcagggtggtgggcacagccgtaggaccaacacc
tcaccaagtcgccctgatcaggatagctgccatgagcaatgggaaaaaagtgtaaatgat
ggaagccgcaataaatctaagtctacttggagaccaattcgggaggtgttgaacgtggac
accgtgctaaacgacctggagcagcgtcgtcaacagcaacacgaaagcccccggcacagt
aagccttcatcacaagaacgagtgcacactgaacaaagccgagacggcgagcaggaagat
gtacgaaccagggatgataggaagcagaagtgtttaatgacgatttatgaggaggagcag
cgacataaaactgagagccacagctctgtagagtcagagagcagggccaaccaaagggac
agcagacttaagggggggccaaagacactgctgcaaagtgatacatggaccatccaaagg
acagagtctggctatgagagcagcgatagactcagcagtggctccaccaaccctgattca
cctggcatcgatagctttgttgtcaaagaccagcaatcaacaccagaggcacagctgcaa
agtcagctgcaacaaaagggaggcaatgacaaatccagtataatgtcctcacctccacac
aacggtaaacatcaacctaaacctcagggaaggaaccatgaccaagtttcacattcacat
ctaaagtgcagtccaactgcgagatggaaatcaaagtacacttctagtacctccagaaaa
gcagtatcctcagagagggaatccacaggctcggacaacaagtcgagtgagcagaccacc
tgcagagggcacgcaggagaaagtccagctctgaggcacattacaaaaaacagcaggtct
gaatggaacagcgccgatgatttagctctctctgagcctgaggacagagaaaaccctggc
gcctctgaattccagtgtcctcatatagtcctaccataccactctcccagcaatgtgacc
atggagccactccaactgaacaatcagcgacagctcggcacaccggggtcgcctcaactg
cgaccaacccagcggatcgccccttgccagggtgaagagagccacacagtatttcttccg
aggatgcttcaagaaccctttccattgagtccttgtctttccacgtccatattctatgtt
agtcctcacaggaggcctgacattaaaggcctcagaaccttctcagatgcgagttccaag
tcgggctctgacccagagaggagcatcccgtcgtcatgtgaaattgaggaaagactgcag
aatggatgcagagtggaacaggcagtgccagcccaaggggtttctctgacaacatacttc
actgtggataactgtatgacggaaacgtaccgtctcaagtaccacaaccagaggcccctt
gtccttccagccatggtgccgtggacaatggttgtgactgagcgcagagataccggccac
acactccccactgacacatactcacaagatgtgcccaaagccagacctgaaacaagccat
aatagcaataaatctactgcaaaatggaacccagtgacagccaaaggactggatgaacgt
gtttttttatga
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