Pseudoliparis swirei (Mariana hadal snailfish): 130189970
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Entry
130189970 CDS
T09868
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130189970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130189970
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
130189970
SSDB
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Paralog
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Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
130189970
NCBI-ProteinID:
XP_056265000
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All DBs
Position
24:complement(28096419..28116558)
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AA seq
553 aa
AA seq
DB search
MALNVLGLVVMAGFYLLILATGIWASMRSKKAEKKFLGDGMEMTLLAGRDINLLVGIFTL
TATWVGGGFILGIAEATYNPTMGAVWALMPVPYVLTFFLGGAFFAKPMRENKYLTMMDPF
QQKYGNVLSTLLIFPALVADVLWVTRTLVSLGGTMSVILELSYFYSIVISAVVAIIYTLM
GGLYSVAYTDVIQLILIFISLWVCVPFLLTNPHSLDISLTAYNQTFQAPWVGTVEPYEAG
KWFDDFMLLALGGLAYQAFYQRILSASSYTQAQVTCYASSAFCLVLGIPSILVGAVAAST
DWNSTAYGLPTPYERDQAGSILPIALQYLTPPYISVIGIGAVAAAVMSSMDSALLSSASM
FSSNIYKNIFRKQASDCEMQWVIRISVVVVGLAGTALTFLDNSVLVFWLVGVDMSYTIMF
PQLVCVLFFKISNGYGASLGYLMGIVLRLLSGEPLIGLPPAIRFPGCRMDQEGNLIQYFP
FRTTIMIISLLSILLFSWLSSILFNKGLLAERWDVFKIKRKEKPTAAAEEERSDSGNEEV
STAKQLLDTTTSF
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaatgtgctgggtctggtggtgatggcgggcttctacctgctgatcctggca
acgggcatctgggcgtccatgcgctccaagaaggccgaaaagaagttcctgggcgacggc
atggagatgacgctgctggccggacgcgacatcaacctgctggtcggcatcttcactctg
accgccacgtgggtgggcggaggcttcatcctcggcatcgcggaggccacgtacaacccg
acgatgggcgcggtgtgggcactcatgcccgtgccgtacgtcctcaccttcttcctcggt
ggggctttctttgccaagcctatgagagagaacaagtatctgacaatgatggaccccttc
caacagaaatatggcaacgttttgagcaccttgctgatctttcccgcactcgtggctgat
gtcctgtgggtgacgcgcacgctcgtcagcctgggtggaacgatgagcgtgatcctggag
ctgtcctacttctactccatcgtcatctccgccgtggtggccatcatctacacgctgatg
ggggggctctactcggtggcctacacggacgtcatccagctcatcctcatcttcatcagt
ctgtgggtgtgtgttcccttcctgttgaccaaccctcactctctggacatctcgctgacg
gcctacaaccagaccttccaggccccgtgggtcggcacggtggagccctacgaggccggc
aagtggttcgatgacttcatgctgctggctctgggcggtttggcctatcaggcgttctac
caaagaatcctgtctgcctcgtcttacacccaggctcaagtgacctgctacgcctcctcg
gccttctgcctggtgctgggtatcccctccatcctggtgggggccgtggccgcctccaca
gactggaactcgaccgcttatggcttgccgaccccgtacgagcgcgaccaggcgggctcc
atcctccccatcgccctgcagtacctcacgccgccatacatctccgtcatcggcatcgga
gccgtggccgccgccgtcatgtcctccatggactcggccctgctgtcctcggcctcgatg
ttctcctcgaatatctacaagaacatcttcaggaagcaggcgtccgactgtgagatgcag
tgggtgatccgtatctccgtggtggtggtgggcctggccggcaccgccctcaccttcctg
gacaacagcgtcctggtcttctggctggtgggcgtggacatgtcctacaccatcatgttc
ccccagctggtctgcgtcctcttcttcaagatctccaacggctacggggcgtcgctgggc
tacctgatgggcatcgtcctgaggctgctgagcggcgagcccctcatcggcctcccgccc
gccatccgcttccccggctgccgcatggaccaggagggaaacctgatccagtacttcccc
ttccgcaccaccatcatgatcatctcgctgctgtccatcctgctcttctcctggctgtcg
tccatcctcttcaacaaaggcctgctggccgagaggtgggacgtgttcaagatcaaacgc
aaggagaagccgacggccgccgcggaggaagagaggtccgactccggcaacgaagaggtg
tcgacggccaagcagctgctggacaccaccaccagcttctga
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