Pseudoliparis swirei (Mariana hadal snailfish): 130190022
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Entry
130190022 CDS
T09868
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like isoform X1
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130190022
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
130190022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
130190022
NCBI-ProteinID:
XP_056265104
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Position
24:21800485..21807143
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AA seq
1167 aa
AA seq
DB search
MGGVEMDTQSCIDHSILAIFEDSSVSSEYKSGAEEESETLLSALTEMLDSVEDDDETLSP
FNTLPDTKLLAHPERRDTSVELLLADRLRPRSKSPSVTFTMKINGEKEDESKLGRTSPQQ
LFKQQSQTLFHSTNKKADAEVFTSTYLVNLVKLMHPYCLKLHVEEEEEGDELRENHTVFS
QEEVWKYERPSEDSDEEINVVSDDEVTVDDPKEEEEEAEKSYNILLKSVLLNGNISRTPP
PTEKKQVSFGSVQVASFESTEKGSMESNLTTGPTSETASVPLNSSDALDTPAGSALEPQA
LPSEMSSDKTSALPLRGETKVKSLSLQQYRQLRQKRLPLVEKERNYTTMWPCVSEAPTEL
TPILCLQGQRPNSCAPNEAHRLPDGRRSGADPLHLSQTPGHKTHCVSAPPTPHPPQPKPS
TRPQRSGLKHSRTESKMVSSANLQPKVTANPNVTTHESKKSPVKKPTLLSSDPPNPVLLP
RPVSQTTSPAADPSSSLSKSKVEFLNRDSNRDDTRHFPEMLNESSGTSLQRQPASSGPTP
EVLLVNQRCTTLQEFKQRLAEIASGVSAGPPARCQTATRIKSASECKELQPRGCSSTSTR
EEAQLQPKSAPSPGPDTVRRIKCPSIAGPVDSPEPVEGRWSEGHLSGSTSEEPTATLQLV
CREPSATADSGIEAPDLTSLLEQFEETQAKEENEPESKLAPSQSNLRTASALTQRASVET
LEPLSTSESPGSPATVGRSPPLGTDIVLSAQQDPPARRRTPPSKAIQIIDPRPLPSKKAH
GGPPAAHIPPRVYSSVSSDHDYCASADRSVTGAAQRSRASKPKDVSQTSDEDQVATHDSS
AAAECKNPTSACELGDAVGAVLSSAATQRLAERPGTRSETSPAAAVVPTAPRRVRAAEDE
TVSCTLPTPPPSPPARGREKRRYRRRSPRSDSSSSSLSSSSSSSSASPSPKRQKRRHKRR
HKRSESSSCSSSSPSRSISGSPSRRYRWSYSRSSRSWSQSRSTSRSRSPSTRVCRRQWAD
VYSRESRKLRREHEIRIQKLKAIDERRVVYVGRIRRSMTHDELRERFSQFGVVECVSLHF
RERGDHYGFVTFYNTDDAFAAIDNGGKLRKPDELPFDICFGGRRQFCNSHYADLDANRDA
EPAPAKPRSEDLDFDSLLKQAQRGLKR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcgtggagatggacacccagtcctgtatcgatcactccatcctggccatcttt
gaagactccagtgtctcctcagagtataagagcggggcggaggaagagagtgagactctg
ctgtcggctctgaccgagatgctggacagtgtggaggatgacgacgagactctgtctccc
ttcaacaccctgccagacaccaagctcctcgcccacccagagcgcagggacacctcagtg
gaactattacttgctgatcgacttagaccaagatccaaatcaccaagtgtaacattcaca
atgaagattaatggagaaaaagaagatgagagcaaactggggagaaccagtcctcaacag
ctgttcaagcaacagagtcaaacattgtttcactccacgaataagaaagcggatgccgaa
gttttcacctcgacttatctcgtcaacctggtgaagctcatgcacccgtactgcctgaag
ctgcacgtggaggaggaggaggagggggatgaactgagagagaatcacacggtattctct
caggaagaggtgtggaagtatgagagacccagtgaagacagcgatgaagagataaacgtt
gtgtctgatgatgaggtaacggtggacgacccaaaggaggaagaagaggaggctgaaaag
agctataacatcctcttgaagagtgtgctgctgaatgggaacatatccagaactccacca
cccacagagaagaaacaggtgagctttggctccgttcaagtggcttcatttgaatcaaca
gagaaaggatcgatggagagtaatttaacaaccgggccgacaagtgagactgcatcagtg
ccactgaacagctccgatgcacttgacactccagctggctcagcactcgaaccccaagct
ctgccctcagaaatgagcagcgacaagacgtcagctctgcctcttagaggtgagacgaag
gtcaaatcactcagcctccagcagtacagacagctgcggcaaaagaggctgcctctggtg
gagaaagagaggaactacaccaccatgtggccctgtgtttctgaggcgcccacggagctg
acccccatcctctgtttacaaggtcaaagaccaaacagctgtgcaccaaacgaagcacac
cgacttcccgatgggagaagaagtggtgctgatccgctccatttatctcaaactccaggt
cacaagacccactgcgtctctgctccgcccacgcctcaccccccacagcccaaaccatcc
actcgtccacagcgcagcggattgaagcactcgagaaccgaatccaaaatggtttcctct
gccaatctgcagccaaaggtcaccgctaacccaaatgttaccacgcatgaaagcaaaaaa
agtccagtaaagaaaccaacactgttgagtagcgatcccccaaatcctgtcctcctccct
cgaccagttagccaaacaacatcaccggccgctgacccctcttcatccttatccaagtcc
aaagtggagttcctcaacagagactccaaccgtgacgacacgagacactttccagaaatg
ctaaatgaatcctcaggcacatctcttcagagacagccagcctcctcgggtccaacgcct
gaggtgttgttagtaaaccagcgctgcaccaccctccaggaatttaaacaaaggctggct
gagatcgcttcgggtgtctccgccggtcctccagcacggtgccaaaccgcaacacgaatc
aaatctgcctcagagtgcaaggaactgcagcctcggggatgcagttcgacctcgactcgg
gaagaagcccagctgcaaccaaagtccgctccgtcgccaggtccagacacagtgaggcga
ataaagtgtccttccatcgctggtcctgtggactctcccgaaccggtcgaggggagatgg
tcagagggtcacctcagtgggtccacgtctgaggaaccaacggccactctgcagttggtc
tgtagagagccgagtgcaacagctgactcagggattgaagcaccggatctgaccagcctg
ctggaacagtttgaggaaacacaagctaaagaggagaacgagcccgagtccaaactcgct
ccttcacagtcaaacctacgaacggcgtctgcgttaacgcagagagcctccgtggaaaca
cttgaaccgttgagcacttcagaatcacccgggagtccagcaaccgtcgggaggtcgccg
cccctcggcacggacatcgtcctcagcgctcaacaagatccgccagcaagacgcagaact
cctccgtccaaggccatccagataatcgacccccgtcctctcccgtccaagaaggcgcac
ggcggccccccggctgctcacatccctcctcgcgtgtattcatccgtgtcctccgatcac
gattactgcgcgtccgcggaccgctcggtaaccggcgccgcgcagcgcagcagagcctct
aaacccaaggatgtgtctcagacctccgatgaggaccaggtggcgacccacgactcgagc
gccgccgctgagtgcaaaaacccgacctcggcctgcgagctcggcgacgccgtcggagca
gttctgtcctccgcagcgacgcagcgtctcgccgagcgacccgggacccgatcggagacg
agcccggccgcagccgtcgttcccacagcgccgcgccgcgtccgcgccgccgaagacgag
acggtgtcgtgcacgctccccacacctccacccagcccccccgccagaggtagggagaaa
aggagatatcggaggagatctcctcgttcggactccagctcctcttccttgtcgtcgtcg
tcctcctccagctctgcatctccctctccaaaaagacaaaagcgccgccacaagcgccgc
cacaagcgctcagagagcagttcgtgttcgtcgtcgtcgccctctcgctccatttccggc
tccccgagtcgccgctacaggtggtcctactcgaggtcgagcaggtcttggtcccagtct
aggtccacatccagatccagatcaccgtccacgcgggtttgccgtagacagtgggccgac
gtttacagcagagagtccaggaagctcaggagggagcacgagatcaggattcagaaactg
aaagccatcgacgagcgcagggtggtgtatgtcggccgcatccgcaggtccatgacgcac
gacgaactgagggagcgcttctctcagttcggagttgtggagtgtgtgtcgcttcacttt
agagagagaggtgaccactacggctttgtcacattctacaacacggacgacgctttcgcg
gccatcgataacggcgggaaactaaggaagccggatgagctgccgtttgacatctgcttc
ggcggaagaagacagttctgcaactcgcactacgccgacctcgacgccaacagagatgca
gaaccggctccggccaagcccaggtctgaggacctggactttgattcgttgctgaaacag
gcccagagaggattaaagaggtag
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