Pseudoliparis swirei (Mariana hadal snailfish): 130190039
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Entry
130190039 CDS
T09868
Name
(RefSeq) carbohydrate sulfotransferase 12-like isoform X1
KO
K04742
chondroitin 4-sulfotransferase 12 [EC:
2.8.2.5
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
130190039
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130190039
Enzymes [BR:
pswi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.5 chondroitin 4-sulfotransferase
130190039
Glycosyltransferases [BR:
pswi01003
]
Unclassified
Sulfotransferases
130190039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_2
LZ3wCH
Motif
Other DBs
NCBI-GeneID:
130190039
NCBI-ProteinID:
XP_056265149
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All DBs
Position
24:3714305..3720922
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AA seq
440 aa
AA seq
DB search
MGTWRGLRVAFILGSLFMILLIIAYWDDVGGFNLYPLQEPRRASPHPRTTAAPSRPTYAG
RSQTSSPPATAPSATPLPEETGGAADARTEEEGKKKLAPREEETRADEEEKGRSRNAEDE
REQEARKRRIGDVCSGKDAVEFPGRTRAFEQIPNRELDHLIVDDTHQIIYCYVPKVACTN
WKRVMVVLSQSLISPSSGKPYTDPEAVPPDLVHNSSLHLTFAKFWRRYGSLSRHLMALKL
QHYTKFLFVRDPFVRLISAFRNKFGRPNEDFYKQFGSVMLRRYGNVSGGLPETAAEAFAA
GVKPSFQQFVAYLLDPETETESVFNEHWRQVFASRRWESLREIKTTARREVYRLCHPCQV
KYDFIGRLETLETDAEHLLKLLEVDHLLRFPSGARNRTAASWERDWFAQIPIAMRRELYK
LYEPDFEMFGYPKPDSTLHQ
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgtggcgtggtctgcgagtggcgttcatcctgggctctttgttcatgatcctg
ctgatcatcgcctactgggacgacgtcgggggcttcaacctctacccgctgcaggagccc
agacgcgcgtcgcctcaccctcggacgaccgccgcgccctcgcgcccgacgtacgccggc
agatcccagaccagttctccccccgccacggctccgagtgcaacgccgctgcccgaggag
acgggaggagctgctgacgcgcgtacagaggaggaagggaagaaaaagctagcgccgagg
gaggaggaaacgagggcggacgaggaggagaaggggagaagtcgtaatgccgaggacgaa
agggaacaggaggcgaggaagcggaggatcggggacgtgtgctcgggaaaggacgccgtc
gaattccccgggaggactcgggcgtttgagcagatcccaaacagggagctggatcacctg
atcgtggatgacacgcaccagattatctactgctacgtgcccaaggtggcgtgcaccaac
tggaagcgagtgatggtggtcctgtcccagtctctgatctcgccctcctcggggaagccg
tacaccgacccggaggctgtaccccctgacctcgtacacaactcctccctccacctcact
tttgccaagttttggcgccgctatggctctctgtcccgccacctgatggcactcaagctc
cagcactacaccaagttcctgtttgttcgagatcctttcgtgcgtcttatctcggccttc
aggaacaagtttggaaggcccaacgaggacttctacaagcagtttggctccgtcatgctg
cgtcgctacggcaacgtgtcgggcggtttgccggagacggcggcggaggcgttcgccgcc
ggagtcaagccgtcgttccagcagttcgtcgcgtacctgctggatccggagacggagacg
gagagcgtcttcaacgaacactggcggcaggtattcgcctcgcgccgctgggaaagcctc
cgcgagataaagacgaccgcgcggcgggaggtgtaccgcctgtgccacccgtgccaggtg
aagtacgacttcattggacgactagaaaccctggaaaccgacgcggagcacctgctgaag
cttctggaggtggatcacctgctccgcttcccttcgggggctcgaaaccgcaccgcggcc
agctgggagcgagactggttcgcacagattcccatcgcgatgaggagagaactgtacaag
ctgtacgaaccagactttgagatgttcggctaccccaaacctgacagcacgctgcaccag
tag
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