Pseudoliparis swirei (Mariana hadal snailfish): 130190057
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Entry
130190057 CDS
T09868
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130190057 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130190057 (sart1)
04121 Ubiquitin system [BR:
pswi04121
]
130190057 (sart1)
Spliceosome [BR:
pswi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
130190057 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
130190057 (sart1)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130190057 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
130190057
NCBI-ProteinID:
XP_056265198
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All DBs
Position
24:6261839..6264633
Genome browser
AA seq
775 aa
AA seq
DB search
MGSSKKHKEKSRDKEAEDRRREHKKHRHKERERDASDRDATRDKDKDKRKRSRSRERTGR
DRSKGERSTAEPRVKKEKVDLAYEASSAEVGPQSASGDASLSIEETNKLRAKLGLKPLEL
NENKKELGTKEDPLVAETINPVLIKKQKDMREKLAAMKEKRIQNLKLGKIKAIAEEDWLD
DASAWVEKSRNMAKEKELAEKRAKVLQEMDEEFGVSSLVDEEFAQSKKHLYTARDLKGLK
VQHKVDSFNEGQTVILTLQDKGVLEEEEDVLVNVGMVDKEHTEKNVELLKKRPEYKPYEE
DESVDDMITAKPHTVLSKYDEEIEGEKKKSFRLSTGGFADGEREREIQAMREALRNQAQS
LEMPALAIASEYYTSTEMVGFKKTKPRVRKIRKKEKQTAADELRIDDTRSTDFGSRTRGR
GRKQLEDVVEKVEEETAVASNVPQMSDDVRMAEMEMSDEEDFTVPESTVFEEDEAEQELQ
KQLEKQRKLKQRQLLKDSGEKVAEKIKELDEGGLENDPEHRNGLNIVFNATSEFCRTLGD
IPTYGLSGNREDQEDIMDFEEKEEKDDAGDSESELDDNVGWSTVNLDEELKQPDFATASA
TILDEEPIVKSGLAAALLLCKNKGLLDTEMQKISRVRATKGALPNDNYCIEDKMGFDDKY
SRREEYRGFAQDFKDKDSYKPEVKIEYVDESGRRLTPKEAFRQLSHRFHGKGSGKMKTER
RMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGGGKSMNANTITK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggggtcatccaagaaacacaaggaaaagagtcgcgacaaggaagcggaagaccgccgt
cgcgaacataagaaacatcgccacaaggaacgagaacgagatgcttcggaccgggacgct
actcgggataaagacaaagacaaacgaaaacgctccaggtcccgggaaagaaccggacgg
gaccgcagcaaaggtgaaaggagcaccgccgagccacgcgtgaagaaggagaaagtcgat
cttgcctatgaagcgagcagtgcagaagtggggccccagtcagcaagtggagacgcatct
ctcagcatcgaggagacgaacaagctcagagccaagctgggtctgaagcctctggaatta
aatgagaacaagaaggagctcggcaccaaagaggatccgttggtggcagagacgatcaac
cctgttctcattaaaaagcagaaagatatgagggagaagcttgcagctatgaaagaaaaa
cgcatccagaacctgaaactgggaaaaatcaaggccatagcggaggaagactggttggat
gatgcctctgcctgggttgagaagagcagaaatatggcaaaagaaaaggagctggccgag
aaaagagccaaagttctgcaggagatggacgaggaattcggcgtcagcagtctggtggac
gaggagtttgcacaaagcaaaaagcatttgtacaccgctcgtgatctaaagggactcaaa
gtgcagcacaaggtagattccttcaatgagggccagactgtcatcctgaccctacaagac
aagggtgtactggaggaggaggaagatgtgcttgtgaacgtgggaatggtggacaaggaa
cataccgaaaagaacgtggagttgttaaagaaaaggcctgaatacaagccctatgaagaa
gacgagagtgtggatgacatgattacagcgaagccccacactgtcctgtcaaagtacgac
gaggaaattgagggtgaaaagaaaaagagtttccggttgagcacgggaggctttgccgac
ggcgagcgagaacgagagattcaagccatgagagaggctctacgaaatcaggcccagtcc
ttggaaatgcctgctcttgctatcgcctctgagtattacacatctacggaaatggtgggc
tttaaaaagaccaaaccccgcgtgaggaaaatccggaagaaggagaagcagacggctgca
gacgagcttcgcatcgatgacactcgcagcaccgattttggctcgaggacgcgtggccgg
ggtcgcaaacagttggaggacgtcgtcgagaaagtcgaggaggagaccgccgtggcctcc
aatgtcccccaaatgtcagatgatgttcggatggcagaaatggagatgagcgacgaggaa
gacttcactgttccagagtcgacggtgtttgaggaggatgaggcggagcaggagctgcag
aaacagctggagaagcagaggaagctgaagcaaaggcagctcctcaaagactctggggag
aaggtggcggagaagatcaaagagctcgacgaaggcggccttgaaaatgatcccgagcat
aggaatgggttgaacatcgtcttcaacgccacctcagagttctgcagaaccctgggtgat
atcccgacgtacgggctgtctggcaacagagaggaccaagaagacattatggactttgag
gagaaggaagagaaggatgacgccggagattcggaatccgaattggatgacaatgttggc
tggagcaccgtgaacctggacgaagagctgaagcagcccgattttgcgacggcctctgcc
accattttggacgaagagcccattgtcaagtctggtctcgctgctgctttgctgttgtgc
aaaaacaaaggcttgttggacactgaaatgcagaagatctcccgtgtcagagcaacaaaa
ggcgccttgcccaacgataactactgcatcgaggacaagatgggcttcgacgacaagtac
agtcgcagagaagaatacaggggcttcgctcaagatttcaaggacaaggatagctacaag
cccgaggtcaagatcgagtacgtggatgaatccggccgacggctcactccgaaagaagcg
ttccggcagctttcacatcgattccacgggaaagggtctgggaaaatgaagaccgagagg
aggatgaaaaagctggaggaagaggcgctgctgaagaagatgagcagcagtgacactcct
ctcgggacggtggctttgctccaggagaagcagaaatctcagaagactccatatattgtg
ctgagtgggggtgggaaaagtatgaatgcaaataccatcaccaaataa
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