Pseudoliparis swirei (Mariana hadal snailfish): 130190089
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Entry
130190089 CDS
T09868
Symbol
gatb
Name
(RefSeq) LOW QUALITY PROTEIN: glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00970
Aminoacyl-tRNA biosynthesis
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130190089 (gatb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pswi03029
]
130190089 (gatb)
Enzymes [BR:
pswi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
130190089 (gatb)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
130190089 (gatb)
Mitochondrial biogenesis [BR:
pswi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
130190089 (gatb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Flavi_NS1
STAT_int
DUF2846
Motif
Other DBs
NCBI-GeneID:
130190089
NCBI-ProteinID:
XP_056265258
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All DBs
Position
24:6855981..6874706
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AA seq
549 aa
AA seq
DB search
MAAPSVAASEATDNMNKQISLLYPKTSCVIRRISAPRARCDSQLQPRAKSAPQQLVGVVG
LEVHAQINSNTKLFSGSSVRFSAPPNSLVSPFDASLPGTLPVLNKRCVEAAVMTALALNC
TINKKSLFDRKHYFYADLPAGYQITQQRRPIAVDGTLTYSILGGKKRSQVIRRTSTIKQI
QLEQDSGKSLHDDLRSQTLIDLNRAGVGLMELVMEPDMSCGEEAAAAVRELQLILQALGT
CQANMSEGQMRVDANVSVHRPGEPLGVRTEVKNINSVRYLARAIDYEIQRHKEVLQRGGT
VKNETRAFDSKSGETIPMRDKEGLQDYRFMPEPNLPPLIVYEDNASLPTGIDACQAVVVQ
EIRAGLPELPGVKRDRLVQTYGILPEHSFTLVNEDGLVEYFEAVLKATTREPRKVIGWVT
NELVGHLKQRDMSVSQSPISPSALAELLERQETGQISSSVAKQVFQEMWRSSGKTASQII
QEQDLGLVSDATQLHNICQKVVDSHPVEVHAIRNGNKKVLNKLMGLVQKETKGRADPVLV
RAILEEKAS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccctctgtggcagcaagtgaggcgacagacaatatgaataaacaaatatca
ctattgtatccaaaaacctcctgtgtaattagacggataagcgcaccacgtgcgcgatgt
gacagtcaactgcagccgagagcgaaaagtgctccccagcagctggttggcgtggtgggt
ttggaagtccatgctcagattaactccaacaccaagctgttctccggctcgtcggttcgt
ttctcagcccctccgaactccctggtgtccccctttgatgcgtccctacccggcacatta
cccgtcctgaacaaacgatgtgtcgaggcggcggtgatgaccgcgttggctctcaactgc
accataaacaagaaatccctctttgacaggaagcactacttctacgccgacctccctgct
ggataccagatcacgcagcaacggcggcccatcgcagtcgacggcacgctgacctacagc
atcctcggagggaaaaagaggagccaggtgatcaggagaacatccaccatcaaacagatt
cagctggagcaggacagcggcaagagtctccacgatgacctccgcagccagacactcata
gacctcaaccgagcgggtgtaggtctaatggagctggtgatggagccagacatgagctgt
ggagaggaggctgctgcagctgtcagagagcttcagctcatcctgcaagccctcggcacc
tgtcaagccaacatgtctgagggacagatgagagtcgatgccaacgtgtccgtccacaga
ccaggtgagcctctgggtgtcaggacggaggtgaagaacatcaacagcgtccgatacctg
gcccgggctatagactacgagatccagagacataaagaagtcctgcagagaggcggcacg
gtgaaaaatgagacccgggcgtttgattccaaatcgggcgagaccattcctatgagggac
aaagagggtcttcaggactacaggtttatgccagagcccaacctgccccctctgattgtg
tacgaggataacgcatcgctgcccactggcattgatgcatgccaggcggtggtggtgcag
gagataagggcagggctgccagagctacccggtgtcaaaagagacaggctggtgcagacc
tacggcatcctccccgagcacagcttcacgctggtgaacgaggacgggctggtggagtac
tttgaggccgtgctgaaggcgaccacgagggagcccaggaaggtgattggctgggtgaca
aatgagctggtgggtcacctcaaacagcgagacatgagtgtgagccagagcccaatctct
ccgtctgccctggctgagctgctggaacgccaggaaactggacagatctcctcctcggtc
gccaagcaggtgttccaggagatgtggaggtcatcgggcaagacggcctctcagatcatc
caggagcaggacctgggcctcgttagtgacgccacacagctgcacaacatctgccagaag
gtggtggactcgcaccctgttgaggttcacgccatcagaaacggaaacaagaaagttctg
aacaagctgatgggcctggttcagaaggagaccaaaggcagagccgacccagttctggtg
agggcaattttagaagagaaggcgtcatga
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