KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130190128
Entry
130190128         CDS       T09868                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pswi03036]
    130190128 (kdm4c)
Enzymes [BR:pswi01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     130190128 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     130190128 (kdm4c)
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    130190128 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 zf-HC5HC2H JmjN PHD Tudor_5
Other DBs
NCBI-GeneID: 130190128
NCBI-ProteinID: XP_056265339
LinkDB
Position
24:complement(17148376..17173373)
AA seq 1633 aa
MAGAEVYTPANPTCKIMTFRPTMEEFKDFNQYLVYMESQGAHRAGLAKVIPPKGWKPRRT
YDDIDNLMIDAPIQQMMAGQSGLFTQYNIQKKPINVQEFRRLANSDMYCTPRYLNYEDLE
RKYWKNLTFVSPIYGADVSGSLYDEDVEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKGCEAFL
RHKMTLLSPSILKKYGIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATVRWID
YGKVATQCTCSKDMVKISMEPFVKRFQPDRYTNWMGGKDSAPPDHILATPSTTPELQSWL
QRRRKNKPTNKGCTHSRMRSKRLRTTEEPIGLNGSSALTSSKRKGLCSPPGPKLRRIVAG
KSCREEAEEAEEKEEEEQKEKKKEAELKHNQNSVLSGPCRQMCVVKVNRVESNSLGFLNK
ESSQNTRCSSVPSPASAVKKDLKAEKGTRSAPLRLSGSGVTSRTPEGLGQWPEANKTHPG
IIEPRCCSHEPRDLSSAQDCSIRLSPLEANRLCPSSRTLSTSTETSLRPSGSEVQTASSS
CREDTLSQTSNTDISMDTGTEDYTDSPADAEEMGAAVHMKHINSHSTTEALYDLKTEPVE
GDSSTSCGSFSSVAHNCSLVMENSFPTLLQRNAVDMPQLTPVSADTVGLCPMPPVLIQEM
PSLTPANDGLTVAPKASTCSHQVAPVLQRETPTNSPSSHRAKQEEAETDLMMSKEPLAAE
PADEWNLDSTNNCDGAAVSGLRGNVAHLTTSALQEMTKLGDVTPGQTDASSRQLVRSTAP
QTGQQYGVAGMASEDNSAQQDTAFGLSSRGPLLAGTSNNRAPSPPLCSQSDGHLALQLQH
HATYSPPHRMSENPDMEPNSFASSIWKNFNSQGPAVLIQSLHPEIPSDFTHDPLPYTMWT
EPQCKEVTDLEDAEQDLRESEDRGGAGGPLTWAQLEPTSLVSVGAVEPLGLCGDFELHRG
EGEGEGSEALSLCREIGRQREAEERMHSVTAGSPLGMERGEQDGVSDMEEGGSDGDEAEQ
RKTAKGESGSDSSEEEEVEEEENDASNCECDESGLEPGEVCAYAALSVKRTTKSWRHPIR
KPTARAVPTAVKQQAASDDEPLEASLAKGEEEQEEEMEAWAKPLIYLWQNRKSCFTAERE
FNANAATTPPHCAVCTLFMPYYQAEDKVEDDARIEARDSSKSSSPMEGQTRPCRGLKRTI
PLVPEICFSFREQNCPPTPSNPLLQEDGTSPLLYCQGCCLQVHASCYGVAADDVSEQWSC
DRCTEGSFTAECCLCNLRGGALKKTQSAKWAHVMCAVVLPEARFSDEAKRGPIDTSRIPM
QRYKLKCIYCRKRCSGKRKAGACIQCSCGRCPTSFHVTCGHAAGVIMEPDDWPYVVSITC
HRHQSRSSSAKQRACQVPISLGQTVISKHKNLRYYSSRVAEVTSQTFYEVMFDDGSFSND
TYPEDIVSRDCMNLGPPEVGEDVQVKWPDGLFYGAKYLGSNVSYMYQVEFEDGSQVLAKR
EDVYALDEDLPKKVKRRLSTASSMRFQDAFFTTQGESKRQRMPNSRFQKDYVALPGLRTT
GKSTWAQRSHKGK
NT seq 4902 nt   +upstreamnt  +downstreamnt
atggcgggggcagaggtgtacacccctgcaaaccccacctgcaagattatgaccttcagg
cccaccatggaggagttcaaagacttcaaccagtacctggtttacatggagtctcaaggt
gctcaccgcgcaggcctggctaaggtgattcctcctaaaggatggaagccccgtcgtacc
tatgacgacatagacaatctcatgattgacgctcccatccagcagatgatggctggccaa
tcagggctcttcactcaatacaacatccagaagaagcctatcaatgtgcaggagttcagg
cgattagcaaacagtgacatgtactgtacaccacgctacctgaattatgaagatcttgaa
aggaaatattggaagaacctcactttcgtctcacccatatatggcgctgatgtcagtggc
agcctctatgatgaggatgtggaggagtggaacattggccacctgaactctatcttggat
gttatcgaagaggactgcggggtctccatccagggggtgaacactccctatctatacttt
ggcatgtggaagaccaccttcgcctggcacactgaggacatggacctgtacagcatcaac
tacctccactttggagagcccaagtcctggtacgccattccccctgagcacgggaagaga
ctagagcgtctggctacaggtttctttcccaacagcttcaaggggtgtgaggcttttctt
cgtcacaagatgaccctgctctccccttccatactcaaaaagtatggcatcccctttgat
aagatcactcaggaagctggagagttcatgatcaccttcccttatggctaccacgctggc
ttcaatcatggcttcaactgtgcagagtccaccaactttgccactgtgcgctggatcgac
tatggaaaagtagccacacagtgcacatgtagcaaggacatggtgaagatatccatggag
ccctttgtgaaacgttttcaacctgaccgctacactaactggatggggggcaaagattct
gcaccccccgaccacattcttgctactcccagtacaacgccggagctgcagagctggttg
cagaggcggcgcaagaacaaacctacgaacaaaggctgcacacactcccgaatgcgctcc
aagcgcctcagaaccaccgaggagccaattggcctgaatggcagctcagcgttgaccagc
agcaagaggaaaggcctgtgtagtccgcctgggcccaagttgcggaggattgtggcaggg
aagagctgcagggaagaggcagaagaggcagaagagaaggaggaggaggagcagaaggag
aagaaaaaggaagcagagttgaagcacaaccagaactctgttctttctggtccttgccga
cagatgtgtgtggtcaaggtgaatcgtgtagagagtaatagtttgggttttttgaataag
gagtcatcccaaaacactcgctgcagctccgtcccctcccctgcttcagcagtgaagaag
gacctaaaggcagagaagggcacacgcagtgcgccgctacgcctctcagggtcaggggtc
acaagcaggactcctgaaggactcggacaatggcctgaggctaacaagacgcatccggga
attattgagccacggtgttgctctcatgaaccacgagacctctcatcagctcaggactgc
tccatcaggctctctcccctggaggccaacagactctgcccatcttcccgcacactgagc
acttctactgagacgagcttgcgtccctctggctctgaagttcagacggctagttcctca
tgcagagaagacactttaagccaaacgtcaaacactgacattagcatggacacgggtacg
gaggattacaccgacagccctgctgacgcagaggaaatgggcgcagctgttcacatgaaa
catatcaattcacactccacgacagaagcactttatgatctaaaaactgagcccgtagag
ggggatagttccacatcctgtggctccttctcctctgtagcacacaattgtagtttagta
atggaaaatagtttcccaacgctgctccagaggaatgcagtggatatgccacaactcact
ccagtgtcagcagatacggttggactctgccctatgccccctgtgcttatccaggagatg
ccctcgctcaccccggctaatgacgggctgaccgtcgccccgaaagcgagcacgtgcagt
caccaggttgcaccggtgcttcagcgggagacgccgaccaactcgccgtcatcgcatcga
gccaagcaggaagaggcagaaaccgacttaatgatgtcaaaggaacctcttgctgcagaa
ccggccgacgaatggaatttagattctacgaataattgtgacggggcagcagtgtctgga
ttacgaggaaacgtggctcatttaaccaccagtgctctgcaagaaatgacaaagctggga
gatgttactcctggacagactgacgcttcctctcgccagctagttcggagcactgcacct
caaacgggccagcaatacggcgtagcagggatggcaagtgaagataattctgctcaacag
gacactgcattcggtctgagcagtcgtggcccccttttagctggcacctcaaacaataga
gccccttcccctccattatgcagtcagagtgacggtcacctagcattgcaactccagcac
cacgccacatactccccaccgcatcgtatgtccgagaacccagacatggagcccaattcg
ttcgccagcagcatctggaaaaactttaattcccagggccctgcagtgctcatccaaagt
ctgcacccagaaatcccctctgacttcactcacgaccccctgccgtacaccatgtggact
gaacctcagtgcaaagaagtcacggacctggaggatgccgaacaagacctccgtgagtca
gaggaccggggcggggcaggcgggcctctcacctgggcccagctcgagcccacctcgcta
gtttcagttggagccgttgagcccctgggcctttgtggagattttgagctccatcggggg
gagggggagggggaggggtctgaagccctttccttgtgcagggagatcgggaggcaaagg
gaagcagaggagaggatgcactcagttactgctggttcaccactcgggatggaaagagga
gaacaggatggagtgtctgacatggaagaagggggatctgatggcgatgaggcggagcag
cgaaaaactgccaagggagagagcggtagcgactcatctgaggaggaagaagtggaggag
gaggaaaatgatgcgagtaactgcgagtgtgatgaatcaggcctggaacccggggaggtt
tgtgcctacgccgccctgtcagtgaagaggaccactaagagctggcgccacccaatcagg
aagccaacagcgagggctgtacccactgctgtcaaacaacaggctgccagtgacgatgag
ccccttgaagcaagcctggcgaagggggaggaagaacaagaggaggaaatggaggcgtgg
gcgaaacccctcatctacctgtggcagaacaggaagagctgcttcacggcagagagggag
ttcaatgccaatgcagccaccacgccaccacactgcgctgtgtgcacactcttcatgccc
tattatcaggccgaagacaaagttgaggacgatgcacggattgaagcgagggacagctcc
aaatcctcatcgccaatggagggccaaacacgtccctgcagaggtctcaagagaactatt
cctctggtcccagagatctgtttctctttccgggagcagaactgccccccaactccctcc
aaccctctgctgcaggaagatggcacctcccctctgctctactgccagggctgttgcctg
caagtccatgcaagctgctacggcgttgccgcagatgatgtcagcgaacagtggtcgtgt
gatcgctgcacagaaggaagctttacagcagaatgctgtctctgtaacctccgaggtgga
gctctgaagaaaacccaaagcgccaaatgggcccacgtgatgtgtgcagtcgtactgcca
gaggcacggttcagtgatgaagccaagaggggccctattgacaccagtaggatccccatg
cagcgatataaactgaagtgcatctattgtcgtaagcgctgctcggggaagcggaaggca
ggtgcttgtatccagtgctcgtgtggccggtgtcccacctcctttcatgtgacctgtggc
catgctgccggtgtgatcatggagccggatgattggccgtatgtcgtgtcaatcacctgc
catagacatcaatcacggagttcgtcagctaagcagcgagcgtgccaagtgccgatctcg
ctgggccagacggtaatctccaaacacaagaacctgcgctactacagctcccgggtcgcc
gaggtcacctcccagacgttctacgaggtcatgttcgacgacggctccttctccaacgat
acctaccccgaagatatagtgagcagagattgtatgaacttgggtcctccagaagttggg
gaagatgttcaggtgaagtggcccgatgggctgttctacggggccaagtacctgggatcc
aacgtatcctacatgtatcaggtggagtttgaggatggctctcaggtgctggcaaaaaga
gaagatgtctatgctttagatgaagacctgcctaaaaaggtgaaacgtagactttccacc
gcctcgagcatgcgtttccaggatgccttcttcaccacgcagggcgagagcaaacggcag
agaatgcccaactctcgcttccagaaggactacgtggccctgccgggcctccgtacgacg
ggcaaaagcacatgggcgcaacgcagccacaaagggaaatga

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