Pseudoliparis swirei (Mariana hadal snailfish): 130190132
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Entry
130190132 CDS
T09868
Symbol
pax5
Name
(RefSeq) LOW QUALITY PROTEIN: paired box protein Pax-5
KO
K09383
paired box protein 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130190132 (pax5)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130190132 (pax5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
130190132
NCBI-ProteinID:
XP_056265346
LinkDB
All DBs
Position
24:16045207..16088457
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AA seq
419 aa
AA seq
DB search
MEIHCKHDPFAAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAE
RVCDNDSVPSVSSINRIIRTKVQQPPGQTGSVLAHNIATSVAATQVSAVTGDSASSSYSI
SGILGISSATDVGKRKRDEGLQESPLSNGHGHGGRDFLRKQMRGELFSPQQIEVLDRLFD
GACPXSDLYVNPDVGKTSDYSAMASLAGGLDEMKNSLANPGGGAELGASVSGPQSYSLVP
GRDLASTTLPGYPPHVPPTGQGSYSTSSLTGMVPGGDFSGSPYSHPQYSTYNESWRFPNP
SLLVFQQDYGSLLGTEIGCSSSLFTSQAGQMQGSPYYYSATSRGAGPAATATASAYDRH
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggagattcactgtaagcacgacccgttcgcggcaatgcacagacacggcggggtaaac
cagcttggaggcgtgtttgtaaacggccggcccctcccggacgtggtccgccagcgaata
gtggaactcgcccaccaaggggttcggccctgcgacatctcacgccagctgcgagtcagc
cacgggtgtgtcagcaagatactcggcaggtactacgagacgggcagcatccgccccggg
gtgatcgggggatccaaaccaaaggttgctactcccaaagtggtcgacaagatcgccgat
tacaaacgccaaaaccccaccatgttcgcctgggagatccgggaccggctcctggccgag
agagtgtgcgacaacgacagcgtccccagcgtcagctccatcaacaggatcattcggaca
aaggtgcagcagccgcccggccaaaccggctcagtgttggctcacaacatagcgacgtcc
gtggcggccacacaagtgtcggcggtgaccggcgactcagccagctcctcgtactccatc
agtggcattctgggtatcagctcagccactgacgtgggcaagaggaagagggacgaaggt
ttgcaggagtcaccgctgtccaacgggcacggccacggcgggcgggacttcctcaggaag
cagatgagaggagagctgttctcgccgcaacagatcgaggtattggaccgcctgtttgac
ggagcctgtccgngctctgacctctatgtgaaccctgacgttggcaagacgtccgattac
tcggccatggcctcgctagctggcggactggacgagatgaagaacagtttggccaatccc
ggtggaggggcggagttaggagccagcgtgtcgggtccacagtcctattcactcgttcca
ggtcgagacctagccagcaccactctgccaggctaccctcctcatgttcctcccaccgga
cagggcagctactccacctcctctctcactggtatggtacctggtggagatttttccgga
agtccgtattcccatcctcagtattccacatacaacgaatcctggagatttcccaacccc
agtttattagtgttccagcaggattatgggtctctgctggggacggaaatcggctgctcc
tccagcctcttcaccagccaggcaggacaaatgcaagggtcaccgtactactacagtgca
acatcacggggggcgggccctgctgccactgcaacagcctccgcctacgaccgtcactga
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