| Entry |
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| Name |
(RefSeq) HMG box transcription factor BBX isoform X1
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| KO |
| K21643 | HMG box transcription factor BBX |
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| Organism |
pswi Pseudoliparis swirei (Mariana hadal snailfish)
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| Brite |
KEGG Orthology (KO) [BR:pswi00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:pswi03000]
130190174
Transcription factors [BR:pswi03000]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130190174
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
3:17321233..17345190
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| AA seq |
873 aa
MKGGGRGKEPPVAGEVTGKRPKRKCLQWHPLLSKKALDFSEEEEEEDEEELQKQPVLCAQ
AQESHVQCASTTAEVEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTSKPVKSPSCQPVSNPRKKVWSFS
SNSTKESSTAKKVPKTESMPQLNFSMADPTKMGGLSMLLLAGEHALTNREIPSSTKPSLP
DTASEGNSFPGDEEEMLSGTIPNRVPDRTESRVKSASSTLAESSLSAAPEGKPCRQSALF
QLAEMCLASEAGTMDSAVSQQPEDSSSTASLQKTTIKPEIKEETEDGEDCPPASHTSAPS
PSLSSVTSTSTHATPPQLCSQNARVKNKSKKKEVAKSIDTGETPCQAKKIFKKCNPAVSN
VDSVFSTIEAVAKGAWNDTEEKPKKKIQSSPTGGNSGVPKKKSKPKVKALVQDKEEEMEE
DSRQCGQHNASEVEMTEDTSDVSPKTQAEEAGIGSTELQGSMAEPHLSSCSPSPAKLKEE
DKGKERSSEGTCDSNTESHGSRKSERSCKGALYKTLVSEGMLTSLRANIDRGKRGALRAS
DHDANWSDDSWTVSQIGPNNPKKLKKSKSKEECSQGLGKLEEEFERKFNSLPQYSPMTFD
KKGAAVTKKKKLDSAVVQEDVSKAGKGPSPCQKKTSFHKIVRKHKQKKERPGAVEKVAVQ
NDSTTLDSASRAKPCAPVAIMCPDIQATASIEMLVGSQKRKARKTKITHLVRTADGSVSP
VEEDKTRDLNQEEDKKPLPQQNLCNEKGFHGNPEAEEEAERSAAPQELPAFFSLAALAEV
AAMENVHRGQRGLAENQTKELAQTPVLISCADQ |
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| NT seq |
2622 nt +upstreamnt +downstreamnt
atgaagggtggaggaaggggcaaggaaccacctgttgcaggggaggtcactggcaagcgt
cccaaacgcaagtgcctgcagtggcacccacttctctccaaaaaggctctggatttctcc
gaggaggaggaagaggaggatgaagaggagctgcagaagcagccagtgctgtgtgcccag
gcccaggagtcacatgtgcagtgtgcaagcacaacagcggaagtggaggaggactcgagt
gaacagcgggcacggcggccgatgaatgccttcctcctcttctgcaaacgccaccgctcc
ctggtgcggcaggaacatccacgcttggataaccgcggggccaccaagatcctggctgac
tggtgggctgtgctggagcccaaagagaagcagaaatacactgacatggccaaggagtac
aaggatgcatttatgaaggcgaacccgggctacaagtggtgtcccaccaccagcaaacca
gttaagagcccttcctgtcagccagtcagcaacccccgcaaaaaagtttggtccttctct
tccaactcaaccaaggagtcctccactgccaaaaaagtgcccaaaactgaaagcatgcca
cagttaaacttttccatggcagatcctacaaagatgggaggccttagcatgctgctgtta
gctggggaacatgccctcacaaacagagagatcccttccagcactaaacctagtttacct
gacacagccagcgaagggaactcttttccaggggatgaggaagagatgttgtctggcaca
ataccgaacagagtgcctgaccgtactgagagcagggttaagagtgcctcttccacactg
gcagagtcatctctctctgcggcacctgaaggaaaaccctgcagacagtctgctctcttc
cagcttgctgagatgtgcttagcgtctgaagctgggacgatggactccgcagtgtctcag
cagcctgaggacagctcctctacagcctctctccagaaaaccacaatcaagccagagatc
aaggaggagacagaagacggagaggactgtccccccgcctctcatacatcggccccctca
ccttcgctctcctctgtcacttctacctccacccatgccacccccccacaactctgcagc
caaaacgcacgtgtcaaaaacaagagcaagaaaaaagaggtggctaagtccatcgatacc
ggtgagaccccatgccaggcaaagaagatcttcaagaagtgtaacccggcggtgtcaaac
gtggacagtgtcttcagtacgatcgaggcagtggccaaaggggcctggaacgacacggag
gagaagcccaagaagaagatccagagcagtcctactggtgggaactcaggtgtgcccaaa
aagaaaagtaagcccaaagtcaaggccttggtccaagacaaagaggaggagatggaagag
gacagcaggcagtgtgggcagcacaatgcctctgaggtggaaatgacagaagatacgagt
gatgtcagtcccaagacccaggcagaggaagcaggtataggaagcacagagctgcagggc
agcatggcagagccccacctgtcctcctgcagcccctcccctgctaagctcaaagaggaa
gacaagggaaaggagaggtcgagtgaaggaacctgtgactccaacacagagagccatggc
tccaggaagtcagagcggagctgtaaaggcgccctgtacaaaaccctcgtttctgaggga
atgctgacctccctgagagccaacatcgaccgaggtaaaagaggtgctctccgtgcctct
gatcatgatgcaaactggagtgatgacagctggacagtttctcagataggacctaataac
cccaagaagctgaagaagtccaagtccaaagaagaatgttcacaaggcctagggaaactg
gaggaggagtttgaaaggaagtttaacagtctgccacagtacagcccaatgacatttgat
aagaagggggccgctgtcacaaagaagaagaagcttgacagcgccgtcgtccaagaggac
gtctctaaagctgggaaagggccatctccatgtcagaaaaagacttcattccacaagatt
gttaggaagcacaaacaaaaaaaggagagaccaggtgcagtggaaaaagtggcggtacag
aatgactccacgacgctggattcagcttcgagagccaaaccatgtgcccccgttgccata
atgtgcccagacatccaggccaccgctagtatagagatgctagttggtagccagaagagg
aaggccaggaagaccaagatcacacacttggtgcgcacagctgacggcagtgtgtctccg
gtcgaggaggacaaaaccagggacctgaaccaggaagaggataagaagccattaccacaa
cagaatttatgcaatgaaaaagggttccacggtaatcccgaagcagaggaggaggcagag
aggagcgctgcaccacaagagctacctgctttcttcagcctggcggccctcgctgaggta
gcagccatggaaaatgttcacagagggcagagaggcttggctgagaatcagacgaaggag
ctggcccagacgccagtcctcatctcctgcgctgatcagtga |
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