Pseudoliparis swirei (Mariana hadal snailfish): 130190182
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Entry
130190182 CDS
T09868
Symbol
eif3ba
Name
(RefSeq) eukaryotic translation initiation factor 3, subunit Ba
KO
K03253
translation initiation factor 3 subunit B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130190182 (eif3ba)
03012 Translation factors [BR:
pswi03012
]
130190182 (eif3ba)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
130190182 (eif3ba)
Translation factors [BR:
pswi03012
]
Eukaryotic type
Initiation factors
eIF-3
130190182 (eif3ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_EML_2
Tricorn_2nd
Beta-prop_WDR19_1st
Beta-prop_ELP1_1st
WD40_Prp19
RRM_1
PD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
130190182
NCBI-ProteinID:
XP_056265440
LinkDB
All DBs
Position
24:3704008..3711183
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AA seq
680 aa
AA seq
DB search
MQDTVNMMDDTEYDEEEPSFSDPEDFEDDVEDEELLEDILKEKPQEADGIDSVVVVDNVP
QVGQERLEKLKNVIHKIFSKFGKITTEFYPETDGLTEGFIFLEYGGPSQALEAVKNADGY
KLDKQHTFRVNLFTDFDKYMNISDEWETPEKQPFKDFGNMRHWIEDPDCRDQYSVIYEAG
ERTVIYNNDAKEPIVSEERSRWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSH
QGVSLIDFSSCERYVVTFSPLMDTKEDPQAIIIWDILTGHKRRGFHCESSAHWPIFKWSH
DGKFFARMTADTLSIYEAPSMGLLDKKSLKISGIKDFSWSPGDNVITFWVPEDKDIPARV
TLMQIPTRQEIRVRNLFNVVDCKLHWQRNGDYLCVKVDRTPKGTPGVVTNFEIFRMREKQ
VPVDVVEMKEGIIAFAWEPNGSKFAVLHGESPRINVSFYHVKNNGKIELSKTFDKQQANS
IFWSPQGQFLVLAGLRSMNGALAFVDTSDCTMMNIAEHYMASDVEWDPTGRYLVTSVSWW
SHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLNIEETKIIKKDLKKYSKIFEQ
KDRLSQTKASKELVDKRRSMMDDYRSFREAAQQTYRDQKSARLELRGGMDSDELDSNVED
WEEETIEFFINEEIIPLGDL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacacggtgaacatgatggacgacaccgagtacgacgaggaggagccgtccttc
agcgacccggaggacttcgaggatgacgtcgaagacgaggagctcttggaagacatcctg
aaggagaagccccaagaggctgacgggattgactcggtggtggtggtggacaacgttcct
caggtgggccaggagcgcttggagaaactcaagaacgtcatccacaagattttctccaag
tttggcaagatcaccactgagttctacccagagaccgatggcttgaccgaagggtttatc
ttcttggagtacggtggtccttcccaggccctggaagcggtaaagaacgcagatggctac
aaactcgacaaacaacatacgttcagagtcaacctcttcaccgactttgacaagtacatg
aacatcagtgatgagtgggaaacgcccgagaagcagccttttaaagattttggaaatatg
cgccactggattgaggacccagactgtcgtgaccagtacagcgtgatctacgaagccgga
gagaggaccgtcatttacaacaacgacgctaaggaacccatcgtgtccgaggagagatcg
cgctggacggagacgtacgtgcgctggtctcccaaaggcacctacctggccaccttccac
caacgtggcattgcattgtggggcggcgagaagttcaagcagatccagaggttcagccat
cagggcgtgtccctcatcgacttctcatcatgtgagaggtatgtggtgaccttcagtccc
ctgatggacacgaaggaggacccacaggccatcatcatctgggacattctgaccggacac
aagaggagaggtttccactgcgagagctctgcacactggcccatattcaaatggagccac
gacggaaagttctttgccaggatgaccgcagacacgctgagcatctacgaggctccatca
atgggcttgctcgacaagaagagtctcaagatttccggcatcaaggacttctcatggtct
cctggtgacaacgtcataacgttctgggtacccgaggacaaagatatcccagcgagagtg
actctgatgcagattcccacccgccaggagatccgcgtccgcaacctcttcaatgttgtc
gactgcaaactgcactggcagagaaacggagactacctgtgtgtgaaagtggacaggact
ccgaaaggaaccccgggcgttgtcaccaactttgaaatcttccgcatgagagagaagcag
gttcctgtcgacgtggtggagatgaaggaaggcatcatcgcgttcgcttgggaacccaac
ggcagcaagtttgccgttctccacggagagtctccgagaatcaacgtctccttctatcac
gtcaaaaacaacggcaagattgagctctcaaagacgtttgacaagcagcaggccaacagc
atcttctggagcccccagggacagttcctggtgctggctggtctcaggagtatgaatgga
gctcttgcctttgtggacacgtccgactgcaccatgatgaacatagccgagcactacatg
gcctccgatgtcgagtgggaccccaccggccgctatctcgtcacctccgtctcctggtgg
agccacaaggtggacaatgcatactggctgtggacgttccagggccgtcttctccagaag
aacaacaaggaccgcttctgtcagctgctctggagacccagacctccgaccctgctcaac
atagaagagaccaagataatcaagaaggatctgaagaaatactcaaagatctttgagcag
aaggatcgtctgagccagaccaaggcttctaaggagctggtggacaagcggcggtccatg
atggatgattaccgtagcttcagggaggcggcgcagcagacctatcgggatcagaagagc
gcccgcctcgagctcagaggaggaatggacagtgatgagctggacagcaacgtggaagac
tgggaggaggagaccattgagttttttatcaacgaagaaatcattccccttggagatctg
tag
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