Pseudoliparis swirei (Mariana hadal snailfish): 130190195
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Entry
130190195 CDS
T09868
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04081
Hormone signaling
pswi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130190195 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
130190195 (smad1)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
130190195
NCBI-ProteinID:
XP_056265460
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Position
24:complement(7667354..7693395)
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AA seq
470 aa
AA seq
DB search
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
VSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEFPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKHSMLPRFRNPLQQNEPHMPQNATFPESFTQA
NTMPSTFPNSPVNSYPNSPGSGSSSATFPQSPSSSDPDSPFQMPETPPPAYMPPEEQITQ
DCPQPMDTNLLVPTLPIESNNRPDVQPVAYEEPKHWCSIVYYELNNRVGEAFQASSTSVL
VDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFV
QSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVYELTKMCTIRMS
FVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacctcgctcttctccttcaccagcccggcggtcaaacggctgctgggctgg
aagcagggagacgaggaagagaaatgggcggaaaaggccgtggatgctctggttaagaaa
ctgaaaaagaagaagggagctatggaggagctggagagggctctcagctgcccgggtcag
gtcagtaactgtgtgacaatcccccgctcactggatggacggctgcaggtgtcccatagg
aaaggtctgccgcatgtcatttattgccgggtgtggcgctggcccgacctgcagtcccac
cacgagctgaaggccctggagtgctgtgagttcccgtttggctccaaacagaaggacgtg
tgtatcaacccctaccactacaaacgagtggacagtccagtgctgcccccagtgttggta
ccgcggaacagcgagttcaacgccaagcattcaatgctgcctcgctttcgcaaccctcta
caacagaatgagccgcacatgccgcagaatgcgaccttcccagaatccttcactcaggcc
aacacaatgccctccactttccccaattcaccggtaaacagctacccaaactcgccggga
agtggcagcagcagcgccaccttccctcagtcaccatccagctccgaccccgacagtcca
ttccaaatgccagagacaccccctcctgcctacatgcccccagaggagcagataactcag
gattgtccccagccaatggacaccaacctcctggttccaaccttgcctatagagagcaac
aaccgaccagatgtgcagcccgtggcctatgaggaacccaagcactggtgctcaattgtt
tactacgagctcaacaatcgggtcggagaggcgttccaggcatcctccaccagcgtgctc
gtcgacggcttcacagatccctccaacaaccgcaaccgattttgcctcggcctgctctcc
aacgtcaaccgcaactccaccattgagaacacccggcggcacatcggcaaaggtgtccat
ctgtattatgtaggcggggaggtgtatgcagaatgtctgagtgatagcagtatcttcgtc
cagagtcgtaactgtaactaccaccacggcttccatcccacgactgtgtgtaagattccc
agtggctgcagcctgaagattttcaacaaccaggagtttgcagagctgctggcccagtcc
gtcaaccacggcttcgaggccgtttatgagctcaccaagatgtgcaccatccgcatgagt
ttcgttaagggttggggagcagagtaccaccgccaggatgtgaccagcacaccctgctgg
attgagatccacctgcatggtcccttgcagtggttggataaggtgctaacccagatgggc
tccccccacaaccctatatcctccgtctcctag
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