Pseudoliparis swirei (Mariana hadal snailfish): 130190197
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Entry
130190197 CDS
T09868
Name
(RefSeq) keratin, type I cytoskeletal 20-like
KO
K07604
type I keratin, acidic
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130190197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130190197
04147 Exosome [BR:
pswi04147
]
130190197
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
130190197
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
130190197
Exosomal proteins of other body fluids (saliva and urine)
130190197
Exosomal proteins of colorectal cancer cells
130190197
Exosomal proteins of melanoma cells
130190197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF5703_N
Motif
Other DBs
NCBI-GeneID:
130190197
NCBI-ProteinID:
XP_056265464
LinkDB
All DBs
Position
24:complement(21628335..21634500)
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AA seq
438 aa
AA seq
DB search
MSVSFSRQSRHFSSRSSSSGSVSGGASLRCAPSVYGGAGGFGTRISESAFSSGSMAPFSS
GSMDPFSSGSMTSYSESTINNEKGTMQNLNNRLAVYLEKVRSLEAANMKLELQIREVYEK
RVASVAHDFTGHFATITGLRAQIMQRYSENQRLVLQVDNARLAGDDFRMKHEMELNMCLM
LEADVSRIRGVRDELNLNTSDLEMQIQSLQEELVSTKITQQEDLRQLRIQQTGTVHVEMD
STESVDLAVVLEEMREQYEAVVVKNKQELQKWFQSQVDTLQSQMVSYSQEVKTFDTELSE
LKRTKQSLEISHQSTISEYQCLKQNLEEVKVQYSVQLSHLQQTINMMEAELQQLRVSVEQ
QQSDYKMLLDIKTRLEMEIAEYRRLLDGEHKKAVIITKVIQVEEHKPLVQRRVKTIVEEI
VDGRVVSSTVDTQVEAVH
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctcgttcagccgccaaagtcgccacttcagctcccgcagctcctccagtggc
agcgtgagcggcggcgcgtccttgaggtgcgcgcccagcgtgtacgggggcgcgggaggt
ttcgggacccgcatctcggagtcggccttctcctccgggtccatggcccccttctcctcc
gggtcgatggaccccttctcttccgggtccatgacctcgtacagcgagtctacgatcaac
aacgagaaggggaccatgcagaacctcaacaaccgcctggccgtatacctggagaaggtg
cgctcgctggaggccgccaacatgaagctggagctgcaaatcagagaggtctacgagaag
agagtcgcttctgtcgcccatgacttcaccggccacttcgccaccatcactggcctccga
gctcagatcatgcagcgatattcagagaatcaacgtctcgtcctgcaggtggacaacgct
cgtctggccggagatgactttagaatgaagcatgagatggagctgaacatgtgtttgatg
ttggaggccgacgtgtcgcgtatccgaggggtccgggacgagctgaacctgaacaccagt
gacctggagatgcagatacaaagtctgcaggaggagctggtgtccacaaagatcacccag
caggaggatctgcgtcagctgaggatccagcagactggcacggttcacgtggagatggac
agcaccgagtcggtggacctggccgtggtgctggaggagatgagggagcagtatgaagct
gtggtggtgaagaacaagcaggagctccagaaatggttccaatctcaggttgatactctc
cagtcacaaatggtgtcatattcacaagaggtgaagacgtttgacacggagctgtcagag
ctgaagaggaccaagcagagtttggagatcagtcatcagagcaccatctcagagtatcag
tgcctgaagcagaacttggaagaagtgaaggttcaatacagcgtccagctcagccatctg
cagcagaccatcaacatgatggaggcggagctgcagcagctgagagtctcggtggagcag
cagcaatccgactacaagatgctgctggacatcaagaccaggctggagatggagatcgcc
gagtacaggaggctgctggacggagagcacaagaaggctgtgatcatcaccaaggttatt
caagtggaagagcacaaacccctcgtccagaggagagtgaagaccatcgtggaggagatt
gttgatggaagggtggtgtcctccaccgttgacacccaagtggaggcagttcattaa
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