Pseudoliparis swirei (Mariana hadal snailfish): 130190199
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Entry
130190199 CDS
T09868
Name
(RefSeq) transcription activator BRG1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130190199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pswi03021
]
130190199
03036 Chromosome and associated proteins [BR:
pswi03036
]
130190199
Transcription machinery [BR:
pswi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130190199
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
130190199
Chromatin remodeling factors
BAF complex
130190199
PBAF complex
130190199
GBAF(ncBAF) complex
130190199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
130190199
NCBI-ProteinID:
XP_056265467
LinkDB
All DBs
Position
24:17853399..17869760
Genome browser
AA seq
1669 aa
AA seq
DB search
MRVGPCCSPRSRRSRAMSTPDPPIGGTPRPGPSPGAMLGPGPSPGSSHSMMGPSPGPPSS
GLSQPGPSGYGPDSMHPLHKSMESLHEKGLGEESRFIQMKGLSMRQGGHSGMGPPPSPLD
QHSQGYHSPLGGSDHSSPVPSNAPPSGPLMPSSSSSSGGPGSASAPLDGPSGDQHSLGPN
NRPGPPGSCGPGPSHGPILGPGVSGLTSGLDSGGPPCPGGPGGPVGPTPFNQNQLHQLRA
QIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQPMLSLAPGTGSGPIGGPAGPVPGPGP
MGSGYSRVHGMMGMPPPGPSGAAGMQGQNPNGPPKAWPEGPMVNAAAPCNTPHKLIPPQP
TGRPSVPPAASPVMPPQTQSPGQPAQPTPMMPYHAKQSRITPIQKPCGLDPVEMLQDREF
RLQVRITHRIAELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQDVVVCMRRDTTLET
ALDAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRS
ITGKMQKVTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAY
LLQQTDEYVANLTELVRAHKAVQALKEIKKKKKKKKKLEIAEAQPAAVGPDGEPLDETSQ
MSDLPVKVIHVDSGNILTGVDAPKAGQLESWLEMNPGYEVAPRSDSEDSEEEEEEEEEEE
PQPSAAPVEENKKISGPDGVDVSEVDVQHIIENAKQDVDDEYSGAAFERVLQSYYSVAHA
VTEKVEKQSSLLINGQLKQYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM
EHKRLNGPSLIIVPLSTLSNWVYEFDKWAPTVVKISYKGSPAARRAFVPQLRSGKFNVLL
TTYEYIIKDKQVLAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYLAPRRVLLTGTPLQNK
LPELWALLNFLLPTIFKSCITFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLL
RRLKKEVEAQLPEKVEYVIKCDMSSLQRVLYRHMQAKGVLLTDGSEKNKKGKGGTKTLMN
TIMQLRKICNHPYIFQQIEESFSEHLGFSGGIVQGLDLYRASGKFEVLDRILPKLLATNH
KVLLFCQMTTLMTIMEDYFAYRSFKYLRLDGSTKADDRGMLLKMFNEPGSDYFIFLLSTR
AGGLGLNLQSADTVVIFDSDWNPHQDLQAQDRAHRIGQLKEVRVLRLCTVNSVEEKILAA
AKYKLNVDQKVIQAGMFDQKSSGNERRAFLQAILEHEEQDEVWGQEVCPHITEEDEVPDD
ETVNQMIARSEEEFDQFMRMDLDRRREDARNPRRKPRLMEEDELPNWILKDDAEVERLTC
EQEEGKLFGRGSRQRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRHKKTTRKRKRNRDL
DLPGPSSSSSGGRGRGDKDEDGKRQRKRGRPPAEKISPNPSALSKKMRKIVDAVIKYKDS
ASGRQLSEVFIQLPSRKELPEYYELIRTPVDFRKIKERIRGYRYRTLGDLERDVMLLFQN
AQTFNLEGSLIYEDSIVLQSVFTSLRQKVEKEEESEGEESEEEEEELEEESESELKVKIR
PGRKDKGGDRGKRSSRRTGRNRAKPVVSDDDSEDQQEEERSPSATDEES
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtaggtccctgctgctcaccgaggagcaggagatccagggcgatgtcaacgcca
gatccccccattggaggcacccctcgcccaggtccctcccctggcgccatgctgggcccc
ggtccctcccctggctcctctcacagtatgatgggccccagccctggccctccgtcctct
ggactctcccagccagggccctctggatacggcccggacagcatgcaccctctgcacaaa
tccatggagagcctgcatgagaagggcctgggggaggagagccgcttcattcagatgaag
ggactgtcgatgagacagggcgggcacagcggtatgggccccccgcccagccctctggac
caacactcgcaaggttaccactctccattgggtggttctgaccactccagccctgtccct
tcaaatgcccccccctctggacctctaatgccatcctcctcctcctcctctggtggtccc
ggctctgcctctgcacctctagacggccccagtggcgatcaacactccctgggtccaaat
aaccggcccggccctccgggtagctgtggcccaggccccagccacgggcccatcctggga
cccggtgtctctgggctcacctccgggcttgattctggaggccctccgtgcccgggaggt
cctggtggtcctgtcggtcctactcctttcaaccagaaccagcttcaccaactcagagcc
cagatcatggcttataagatgctggcccgggggcagcccctgccagaccacctccagatg
gcggtccaagggaagaggccgatgcccgggatgcagcagcagcccatgctcagcctggct
cccggaactggaagcggaccgataggtgggccagcaggaccagtaccagggcctgggccg
atgggctcaggctacagccgagttcatggaatgatgggcatgcctcctccaggcccgtcg
ggtgcagctgggatgcagggacaaaacccaaacggacccccgaaggcctggcctgaaggt
cccatggtgaatgcagcagccccctgcaacactcctcataagcttattccccctcagccc
accggtcggccttcagttccccccgccgcctccccagtaatgccgccacagactcagtcg
cccggccagccagcacagcctactcccatgatgccttaccacgccaagcagagccgcatt
acccccattcagaaaccctgcggcctcgacccagtggagatgctgcaggacagggagttc
aggttacaggttcgtatcactcatcgtattgctgaactggagaacctgccgggttctctg
gcgggtgaccttcgtaccaaagctaccatcgagctcaaagccctccgactgctgaacttc
cagagacagctgcgccaggacgtggtggtgtgcatgcgtcgcgacacgactctggagacc
gccctcgacgccaaggcctacaagcgaagcaagcggcagtctctgcgagaggcgcgcatc
acggagaaactggagaaacagcagaagatcgagcaagagcgcaagcgcagacagaaacat
caggagtacctcaacagcatcctgcagcacgccaaagatttcaaagagtaccaccgctcc
atcacgggcaaaatgcagaaagtgaccaaagcggtggcgacctaccacgccaacacggag
cgggagcagaagaaagagaacgagcgcatcgagaaggagaggatgaggaggctcatggct
gaggatgaggagggctatcgtaaactgatcgaccagaagaaggacaagcgtctggcctac
ctgctgcagcagaccgacgagtacgtcgccaacctcaccgagctggtacgggctcacaaa
gctgtgcaggccctcaaggagataaagaagaagaagaagaagaagaagaagttggagatc
gccgaggctcagcccgctgccgtgggccctgatggagagcctctggatgaaacaagtcag
atgagcgacctgcccgtgaaggtcatccatgtggacagcgggaacatcctgacaggagtg
gacgcccctaaagccggacagctggagtcctggctggagatgaaccccggttatgaggtg
gctcctcgctcagacagtgaagacagcgaggaggaagaagaggaggaggaagaggaggag
cctcagccatcggctgctccggtggaggaaaataagaagatttcagggcccgacggcgta
gacgtgtcggaggtggatgtccagcacatcatcgaaaacgctaagcaggatgtggatgat
gaatacagcggcgcagcgttcgagcgagtcctccagtcgtattattctgtggctcacgct
gtcactgagaaggtggagaaacagtcctctttgttaataaatggacaactcaaacagtat
caggttaaaggtctggagtggctggtttctctctacaacaacaacctgaatgggatcctc
gcggatgagatgggtttggggaaaaccatccagaccatcgccctcatcacgtacctcatg
gagcacaaacggctcaatgggccctccctcatcattgtgccactctcaactctttctaac
tgggtgtatgagtttgacaagtgggcaccaacggtcgtgaaaatctcctacaagggatct
cctgctgccagacgagccttcgtcccccagctgcgcagtggcaagttcaacgttttactc
accacttacgagtacatcatcaaggacaaacaagtactggccaagattcgctggaagtac
atgatcgtggacgagggccaccgcatgaagaaccaccactgcaagctgacccaggtcctg
aacacccactacctggccccgcggcgggtcctcctgacgggcacgccgctgcagaacaaa
ctccccgagctctgggcgttgctgaacttcctgctgcccaccatcttcaagagctgcatc
accttcgagcagtggttcaacgccccgttcgccatgaccggggagaaggtggacctcaat
gaagaggagaccatcttgattattcgtcgtctccacaaagtacttcggcccttcctgtta
cgcagattaaagaaggaagtggaggcacagcttccagagaaggtggagtacgtgatcaag
tgtgacatgtcgtctcttcagagggttctgtacaggcacatgcaggccaagggggtcctg
ctcactgacggatcagagaagaacaagaagggtaaaggaggcacaaagaccctgatgaac
accatcatgcagctgaggaagatctgtaaccacccgtacatattccagcaaatagaggaa
tctttctctgaacatttaggattctctggtgggatagtccagggccttgacctgtatcgg
gcctcgggaaagtttgaggtgttggatcgaatcctaccaaagctgctagccacaaaccac
aaagtgctgctcttctgtcagatgaccacgctcatgaccatcatggaggactacttcgcc
tatcgcagcttcaagtatctgcgtctggatggcagcacaaaagctgatgatagaggaatg
ttgctgaagatgttcaatgaaccagggtcggactacttcatcttcctcctgagcacaaga
gctggaggcctcggcctcaacttgcagtctgccgacaccgtggttatttttgactccgac
tggaacccgcaccaggacctgcaggcccaggaccgagcgcaccgcatcggtcagctgaaa
gaggtgcgcgtgctgcgcctctgcacggtcaacagcgttgaagagaagatcctggccgct
gccaagtacaaactcaacgtggaccaaaaggtcattcaggccggcatgttcgaccagaag
tcctccggcaacgagcgccgggccttcctgcaggccatcctggagcacgaggagcaagac
gaggtctgggggcaggaagtgtgtccccacattactgaggaggacgaggtgccggatgac
gagacggtcaaccagatgatcgcccggagcgaggaggagttcgaccagttcatgcgcatg
gacctggaccgccgtcgcgaggacgcccgtaaccctcggagaaaaccacgtctgatggag
gaagacgagctgcccaactggatcctgaaggacgacgccgaggttgagcggctgacctgc
gagcaggaggaggggaagctgtttggacgtggatcccggcagcggaaggaggtggactac
agcgactcactgacggagaagcagtggctcaaggcgatcgaggagggcacgctggaggag
atcgaggaagaggtgcgtcacaaaaagacgacccgaaagaggaagcgtaaccgcgacctg
gacctccccgggccctcctcttcttcctcggggggacgagggcgaggggacaaagatgag
gatgggaagaggcagaggaagaggggacgaccgcctgctgagaaaatctcccccaatccc
tccgccctctcgaagaagatgaggaagatcgtggatgccgtcatcaagtataaagacagc
gccagtgggcgtcaactgagcgaggtgttcatccagctgccgtctcgaaaagagctgccg
gagtactacgaactgatccgcacgcctgttgacttcaggaagatcaaggagaggattcga
ggttatcgctaccgcactctgggtgacctggagagagacgtcatgctgctcttccaaaac
gctcagaccttcaacctggaggggtcgctgatatatgaagactccatagtcctccagtca
gtgtttaccagtttgaggcaaaaagtcgagaaggaggaagaaagtgagggagaggagagc
gaggaagaggaagaggagctggaggaagaatcggagtccgaattgaaagtgaagatccgt
ccaggaaggaaggataaaggtggagatcgagggaagagaagcagcagacgaacaggccgc
aacagagccaagcctgttgtcagtgacgacgactcagaggatcagcaggaggaggagcgc
tcccccagcgccaccgacgaggagtcctaa
DBGET
integrated database retrieval system
