Pseudoliparis swirei (Mariana hadal snailfish): 130190279
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Entry
130190279 CDS
T09868
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130190279
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130190279
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
130190279
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GFIT
Motif
Pfam:
SSF
Nramp
NV_polyhedrin
Motif
Other DBs
NCBI-GeneID:
130190279
NCBI-ProteinID:
XP_056265575
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Position
24:25853706..25859707
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AA seq
552 aa
AA seq
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MAVSVPGVIAMVVFYMLIFGVGIWAYFQSRKERKKSQIDSIETAVLGNRSISGVVGIFTT
AATWIGGGFIVGTSEMVYNPSMGFVWVSSYILGETLSFIIGGLFFAGPMRERRYLTMMDP
FQIKYGKVPMTLFAVATLVTNILWVTTTLIGLGSTMSVILDLPFTICIWISAVVAIIYTL
MGGLYSVAYTDVIQLILMFISLWFCVPFVLMSPSSTDITQTALNNTFQAPWLGKLEADKA
WRWIDIVFVMALGCLGCQEFHQRTLSANSSATAKINCFAAAAILLIFAIPPVLIGAVAAS
TDWNLTSYGSPSPFERGETTLVMPIVLNHLTPTYVSIVGIGCIAAAAMSSTDSGLLAAAS
IFTANIYKSLLRTQASEREIQWVIRGCVVVAGVIGTSLTSLESNIFALWFLSTVISYIVV
FPQLVCVLFFKISNGYGAVMGMLVGLLLRLLCGEPMIGLPAVIHFPGCTLENGVYLQRSP
VNTISMLSAVAANLLFSYLFSLLIQKNLLPEKWETLNMQLKQQPKRQTPTDSVKDKAICD
NDVSEPMMSTGC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcagtgtcccaggagtaatagcaatggttgtgttctacatgctgatatttgga
gtcggcatctgggcctatttccagtccagaaaagaaaggaaaaaaagtcagattgatagc
attgagacggcagtgctgggaaaccgaagcatcagtggagttgtggggatctttaccact
gcagcgacatggattggaggaggcttcattgttggaacgtcagaaatggtgtacaaccct
tctatgggctttgtctgggtttccagctatattttaggagaaacactaagttttattatc
ggtggtctgttctttgctgggccaatgagagaaagaagatatttgaccatgatggatcct
ttccagatcaagtatggaaaagtaccaatgactctctttgctgtggccacactggtgacg
aacattttgtgggtgacaacaacgctgattggtttaggttcaaccatgagtgtgattctg
gatttaccattcaccatatgcatctggatctctgcagtggtggctatcatctacacgcta
atggggggtctttactctgtggcctacacagatgtcatacagctcattctcatgttcatc
agcttgtggttctgtgtcccctttgtcctgatgagcccctcctccaccgacatcactcag
acggccctgaacaacacttttcaggcaccctggctgggtaaactagaagcagacaaagct
tggagatggatcgatattgtatttgttatggctctgggttgcctgggctgtcaggagttc
catcagaggacgttgtctgctaactcctcagctacggctaaaatcaactgttttgctgct
gctgcaattcttcttatttttgcaatcccccctgtcctgattggtgcagtggccgcatca
actgactggaatctgacttcttatggttctccatctccatttgaacgcggggagacgact
cttgtaatgcccattgtcttgaaccacctcactccgacctatgtctccattgtcggcatt
ggatgcatcgctgccgcggcgatgtcatcgaccgattctggcttgctggctgcagcttcc
atcttcaccgccaacatctataagagcctcctgaggacccaggcttcagagagagagatc
cagtgggtgattcgtggctgtgtggtggtagcaggcgtgatcggcacatctctcaccagt
ctcgaaagcaatatttttgcgttatggtttcttagcacagtgataagctacattgttgtc
ttccctcaactggtctgtgttctcttcttcaaaatctccaacggttatggggcggttatg
ggcatgctggtgggtctgctgttaagactgttgtgtggagagccgatgattgggctaccg
gccgtcatccatttcccaggatgcaccctagaaaacggtgtttatctccaacgctctcca
gtgaacaccatctccatgttgtccgccgtggctgccaaccttttgttttcatacttgttt
tctctgctcatccagaaaaacctgcttccggagaaatgggagacgttgaacatgcaactc
aaacagcagccaaaacgacagacgccaacagacagcgtaaaagacaaagcaatatgtgac
aatgacgtttcagagcccatgatgagtacagggtgttaa
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