Pseudoliparis swirei (Mariana hadal snailfish): 130190281
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Entry
130190281 CDS
T09868
Symbol
chrna6
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-6
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130190281 (chrna6)
04082 Neuroactive ligand signaling
130190281 (chrna6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130190281 (chrna6)
Ion channels [BR:
pswi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130190281 (chrna6)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Red1
Motif
Other DBs
NCBI-GeneID:
130190281
NCBI-ProteinID:
XP_056265578
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Position
24:26260733..26274719
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AA seq
533 aa
AA seq
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MPQLGRADIVPRAFQAPSWMMNCFSSKAEDRLFRKLFRRYNQFIRPVENVSDPVTVEFEV
SISQLVKVDEVNQIMETNLWLRHIWNDYKLQWMPVEFDGIEFIRVPSNKIWRPDIVLYNN
AVGDFLVEDKTKALLKFDGTITWVPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAK
IDLVLIGSKVNLKDFWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTV
NLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGE
YLLFTMIFVTLSIVITVFVLNVHYRTPMTHTMPEWVRSVFLRTLPRIMLMRRPIDHDGKP
EGLDGSGEAGGAGGGGGGGGGGGGRGGKRGKGGKKRKNSLMQVGGGSLNCLEFGDSKFSS
VDGCTGKKYPCPCKHGKETPETPDVGTITRQLRPQSINTVVAFSVVSPEIKQAIDSVKYI
AENMRSRNKAKEVEDEWKYVAMVIDRIFLWVFVTVCFLGTVGLFFQPLLSFFS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaactgggccgtgctgatattgtgcctcgggccttccaggctccttcctggatg
atgaactgcttctcatccaaggccgaggaccggctcttcaggaaactgttcaggagatac
aaccagttcatccgaccggtggagaacgtctctgaccccgtcaccgtcgaattcgaggtc
tccatctcgcagctggtcaaagttgatgaggtgaatcagataatggaaacaaatttatgg
ctcagacatatttggaacgactacaagctgcagtggatgccggtggagttcgacgggatt
gagttcatccgagttccatcgaacaagatctggagacccgacatcgtgctctacaacaac
gccgtaggggatttcctggtggaagataagaccaaggctctcctgaagtttgatggtacc
attacctgggttcctccagctattttcaagtcctcctgccccatggacatcacctacttc
cccttcgactatcagaactgctccatgaagttcggctcctggacttatgataaagccaag
attgacctggtacttattgggtctaaggtgaatctgaaagacttctgggagagcggcgag
tgggaaatcatcgacgctccgggctacaagcacgacatcaagtacaactgctgcgaggag
atctacccggacatcacctactccttctacatccggcgcctgcccctcttctacaccgtc
aacctcatcatcccctgcctcctcatctctttcctcacggtgctggttttctatctcccg
tccgactgcggagagaaggtcacgctctgtatctccgtcctgctctccctcactgtcttc
ctgctcgtgatcaccgagaccatcccctccacctcgctggtcatcccgctcatcggcgag
tacctgctcttcaccatgatcttcgtcacgctcagcatcgtcatcaccgtgttcgtgctc
aacgtgcactaccgcacgccgatgacccacaccatgccggagtgggtgcgctccgtgttc
ctccggacgctgccgaggatcatgctgatgcggaggccgattgaccacgacggcaagccg
gaggggttggatggcagtggggaggcaggaggagccggagggggaggaggaggtggagga
ggtggaggagggagaggagggaaaagagggaaaggagggaagaaacggaagaatagcttg
atgcaggtcggaggaggctctctcaactgtctggagttcggggacagtaagttctcgtcc
gtggacggctgcacgggtaagaaatacccttgcccctgcaagcatgggaaggagaccccg
gaaacaccagacgtggggacgataacgcgtcagctgaggcctcagagcatcaacaccgtg
gtggccttctccgtggtgtcaccggagatcaaacaggcgatcgacagcgtcaagtacatc
gcggagaacatgaggagtcgcaacaaggccaaagaagtggaggacgaatggaagtacgtt
gccatggtgatcgatcggatcttcctgtgggtgttcgtgacggtgtgcttcctgggaacc
gtgggcctcttcttccagcctctccttagttttttctcataa
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