Pseudoliparis swirei (Mariana hadal snailfish): 130190328
Help
Entry
130190328 CDS
T09868
Symbol
ppp2r2ca
Name
(RefSeq) protein phosphatase 2, regulatory subunit B, gamma a
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
pswi04261
Adrenergic signaling in cardiomyocytes
pswi04382
Cornified envelope formation
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130190328 (ppp2r2ca)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130190328 (ppp2r2ca)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130190328 (ppp2r2ca)
09158 Development and regeneration
04382 Cornified envelope formation
130190328 (ppp2r2ca)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130190328 (ppp2r2ca)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130190328 (ppp2r2ca)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130190328 (ppp2r2ca)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130190328 (ppp2r2ca)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130190328 (ppp2r2ca)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130190328 (ppp2r2ca)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
130190328
NCBI-ProteinID:
XP_056265649
LinkDB
All DBs
Position
24:16320392..16378364
Genome browser
AA seq
453 aa
AA seq
DB search
MGEDAESTKINHTFLRDYVTEADIISTVEFNQTGDLLATGDKGGRVVIFQRETESKGESE
EVEETGDSGEYNVYSTFQSHEPDFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKVSERDKRPEGYNLKDEEGRLKDTSTITSLQVPVLKSTDLMVEVRPRRVFSNGHTYHV
NSISVNSDGETYMSADDLRINIWHLGITDRSFNIVDIKPANMEDLTEVITAAEFHPHHCH
LFVYSSSKGSLRLCDMRASALCDRHTKLFEEPEDPGSRSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMDKGPVETYQVHEYLRSKLCSLYENDCIFDKFECVWNSSDSVIMTG
AYNSFFRMFDRETGRGVTLEAWRESSKPRAVLRTRRVYNGGKRRRGDVGVDSLDFTKKIL
HMAWHPSENIIAIAATNNLYIFQDRVNPETQLQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggacgctgagagcaccaaaatcaaccacaccttcctgcgagactacgtcacc
gaagctgatatcatctctacggtggagttcaaccagacaggggacctgctggccacgggg
gataaaggtggccgagtggtcatcttccagagagagactgagtccaaaggggaatcagag
gaggtggaggagacgggggactctggggagtacaatgtctacagcacattccagagtcac
gagccggactttgactacctgaagagtctggagattgaagagaagatcaacaagatcaga
tggctgccccagcagaacgcggcacatttcctcctctccaccaacgataagaccattaaa
ttgtggaaggtgagtgagagagacaagagaccggagggatacaatttgaaagatgaggag
gggcggctcaaggacacctctaccatcacctctctgcaggtgccagtgctgaaatccaca
gatctgatggtagaggtccgtcccaggcgagtattctccaacgggcacacctaccacgtg
aactccatctcagtgaacagcgacggggagacctacatgtcggctgacgacctccgaatc
aacatttggcacctgggcatcacggaccgcagcttcaacatcgtggacattaaaccagcc
aacatggaggatctgacggaggtgataaccgcggcggagttccaccctcaccactgccac
ctgtttgtgtacagcagcagcaagggctccctgcgcctctgtgacatgagagcttcggca
ctctgtgaccggcacaccaaactgtttgaggaacccgaggatccggggagccgctccttc
ttctcggagatcatctcctccgtgtcggacgtcaagttcagccacagtgggcgttacctg
ctgaccagagactacctcaccgccaaggtgtgggacttgaacatggacaagggcccggtg
gagacgtaccaggtccatgaatacctgaggagtaagctgtgttcgctctatgaaaacgac
tgcatctttgacaagtttgagtgtgtttggaacagctccgacagcgtgatcatgacgggg
gcgtacaacagcttcttccggatgttcgacagggagacgggccgaggcgtgaccctggag
gcctggcgagagagcagcaagccccgggccgtgctgcggacccgccgcgtgtacaacggt
ggcaagcggcgccgcggggatgtgggcgtcgacagcctggacttcaccaagaagatcctg
cacatggcttggcacccgtctgagaacatcattgccatagcggccaccaacaacctgtac
atcttccaggatcgcgtcaacccggaaacccagttacagtga
DBGET
integrated database retrieval system
