KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130190328
Entry
130190328         CDS       T09868                                 
Symbol
ppp2r2ca
Name
(RefSeq) protein phosphatase 2, regulatory subunit B, gamma a
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015  mRNA surveillance pathway
pswi04261  Adrenergic signaling in cardiomyocytes
pswi04530  Tight junction
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    130190328 (ppp2r2ca)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    130190328 (ppp2r2ca)
 09150 Organismal Systems
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    130190328 (ppp2r2ca)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pswi01009]
    130190328 (ppp2r2ca)
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pswi03019]
    130190328 (ppp2r2ca)
   03036 Chromosome and associated proteins [BR:pswi03036]
    130190328 (ppp2r2ca)
Protein phosphatases and associated proteins [BR:pswi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     130190328 (ppp2r2ca)
Messenger RNA biogenesis [BR:pswi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     130190328 (ppp2r2ca)
Chromosome and associated proteins [BR:pswi03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     130190328 (ppp2r2ca)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_HPS5
Other DBs
NCBI-GeneID: 130190328
NCBI-ProteinID: XP_056265649
LinkDB
Position
24:16320392..16378364
AA seq 453 aa
MGEDAESTKINHTFLRDYVTEADIISTVEFNQTGDLLATGDKGGRVVIFQRETESKGESE
EVEETGDSGEYNVYSTFQSHEPDFDYLKSLEIEEKINKIRWLPQQNAAHFLLSTNDKTIK
LWKVSERDKRPEGYNLKDEEGRLKDTSTITSLQVPVLKSTDLMVEVRPRRVFSNGHTYHV
NSISVNSDGETYMSADDLRINIWHLGITDRSFNIVDIKPANMEDLTEVITAAEFHPHHCH
LFVYSSSKGSLRLCDMRASALCDRHTKLFEEPEDPGSRSFFSEIISSVSDVKFSHSGRYL
LTRDYLTAKVWDLNMDKGPVETYQVHEYLRSKLCSLYENDCIFDKFECVWNSSDSVIMTG
AYNSFFRMFDRETGRGVTLEAWRESSKPRAVLRTRRVYNGGKRRRGDVGVDSLDFTKKIL
HMAWHPSENIIAIAATNNLYIFQDRVNPETQLQ
NT seq 1362 nt   +upstreamnt  +downstreamnt
atgggcgaggacgctgagagcaccaaaatcaaccacaccttcctgcgagactacgtcacc
gaagctgatatcatctctacggtggagttcaaccagacaggggacctgctggccacgggg
gataaaggtggccgagtggtcatcttccagagagagactgagtccaaaggggaatcagag
gaggtggaggagacgggggactctggggagtacaatgtctacagcacattccagagtcac
gagccggactttgactacctgaagagtctggagattgaagagaagatcaacaagatcaga
tggctgccccagcagaacgcggcacatttcctcctctccaccaacgataagaccattaaa
ttgtggaaggtgagtgagagagacaagagaccggagggatacaatttgaaagatgaggag
gggcggctcaaggacacctctaccatcacctctctgcaggtgccagtgctgaaatccaca
gatctgatggtagaggtccgtcccaggcgagtattctccaacgggcacacctaccacgtg
aactccatctcagtgaacagcgacggggagacctacatgtcggctgacgacctccgaatc
aacatttggcacctgggcatcacggaccgcagcttcaacatcgtggacattaaaccagcc
aacatggaggatctgacggaggtgataaccgcggcggagttccaccctcaccactgccac
ctgtttgtgtacagcagcagcaagggctccctgcgcctctgtgacatgagagcttcggca
ctctgtgaccggcacaccaaactgtttgaggaacccgaggatccggggagccgctccttc
ttctcggagatcatctcctccgtgtcggacgtcaagttcagccacagtgggcgttacctg
ctgaccagagactacctcaccgccaaggtgtgggacttgaacatggacaagggcccggtg
gagacgtaccaggtccatgaatacctgaggagtaagctgtgttcgctctatgaaaacgac
tgcatctttgacaagtttgagtgtgtttggaacagctccgacagcgtgatcatgacgggg
gcgtacaacagcttcttccggatgttcgacagggagacgggccgaggcgtgaccctggag
gcctggcgagagagcagcaagccccgggccgtgctgcggacccgccgcgtgtacaacggt
ggcaagcggcgccgcggggatgtgggcgtcgacagcctggacttcaccaagaagatcctg
cacatggcttggcacccgtctgagaacatcattgccatagcggccaccaacaacctgtac
atcttccaggatcgcgtcaacccggaaacccagttacagtga

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