Pseudoliparis swirei (Mariana hadal snailfish): 130190342
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Entry
130190342 CDS
T09868
Name
(RefSeq) excitatory amino acid transporter 3-like isoform X1
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130190342
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130190342
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
130190342
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDF
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-B_box
zf-RING_5
RING_XB3-XBAT31
DUF3659
ANCHR-like_BBOX
U-box
Motif
Other DBs
NCBI-GeneID:
130190342
NCBI-ProteinID:
XP_056265674
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Position
24:28613012..28642540
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AA seq
805 aa
AA seq
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MENIFNEEGNIFNEEGNIFTEEGNIFNEEGNIFTEEGNIFTEEGNIFNEEGNIFTEEGNP
AMPPWRAGVYLLRNAFAVLCLTAEVLGVALGCFIKFRIQLTQQDQFLIVFPVEVLQRLID
SICLLLIFTSVITSFSGLSGGPSVKVFRRVSAYVVSTTLLSMALGLVLVLTIKPGLDAAG
QDDAEESSLLTAVLDIAWNISPANLFAACYQQDKTEWVELEIEPGDHRFSLDKNVSQVEM
ERQLVESTNDLGLVIWAFAFGAALTKMGTCGQILMNDIAAYNNFSKKFLQLVLRCFPVVV
VFKVASIIIEVDDWELAFKLTKFIGVVVLGLVIHGAFVLPLIYFLCVRRNPYAFIKGIFP
ALKTAFTLSSSSAALPLSLQCCEERLRVDRTVSRFMLPIETDINKHGTVLYEVVAVIFVA
QLNHVDLNLKDWVTIALTAAACSFTAAGMPSRGAATTFSVLTVLGLPAKETSLLVVIEYF
LDRCNTVINVLGDCIGVTLVDRASKRDLEVLEELGQKMERWNDSDAEARTPDEILVHISR
DNTISTPPQLRRDQDQNQEDSGPVFLFSPPESWSDQSSNADTSSSFRVALRRRAPVMADV
HAGPLSLIGLEDELTCSICLSPFDCPVTIPCGHNFCQGCLLAAWKDSYSCPQCRTHFATR
PELKKNTVLSSVVQSFTLRKSEEDDVIVRCDSCMEAEASQTCLTCMASYCEEHLRPHRDN
PAFRLHQLSRPLGDLSERICPDHHKLMELFCSQHSRPICSLCLQQVHKGCPFISPEERRN
LTEVCVYMCVLVHLSLWGPTVQPTM
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggagaacatcttcaacgaggaggggaacatcttcaacgaggaggggaacatcttcacc
gaggaggggaacatcttcaacgaggaggggaacatcttcaccgaggaggggaacatcttc
accgaggaggggaacatcttcaacgaggaggggaacatcttcaccgaggaggggaacccc
gcgatgccgccatggagagccggcgtttaccttctgcggaacgcgttcgcggtcttatgc
ctaacggctgaggtcctgggtgtcgccttgggctgtttcattaagttccgcatccagctg
acccaacaagaccaattcttaatcgtctttccagtcgaggtcctccagcggttgattgat
tccatttgccttcttctcatttttacaagtgtgataaccagtttctctggactgagcggt
ggaccttcagtgaaagtgttccgacgtgtttcggcgtacgttgtctccaccactctgctg
tcgatggctttgggtctggttctggttctgaccatcaagcctggactggatgccgctggt
caagatgacgcagaggagtcctctcttctcactgccgtcctggatatcgcatggaacatt
tccccagccaacctgtttgcggcatgctaccaacaggacaagactgagtgggttgagctg
gagattgaaccaggtgaccatcgcttcagtctggacaagaatgtgtcgcaggtggaaatg
gagcgccaactcgtggaaagcaccaacgacttgggcctggtcatctgggcctttgctttc
ggcgcggcgctcacgaagatgggaacgtgcggccaaatcttgatgaacgacatcgccgcg
tacaacaacttctcaaagaaatttctccagctagttctgagatgcttcccagtagtggtt
gtcttcaaggtcgccagcatcatcattgaggtcgacgactgggaattagcgtttaaactc
acaaagttcatcggcgtagtggttttggggctcgtgatccacggagcattcgtgttaccc
ctgatttacttcctgtgcgtgagacgtaacccctacgccttcatcaaggggatcttcccc
gccttgaagacggcgttcaccctctcgtccagctccgccgcactgccgctctctctccag
tgttgtgaggagcgactccgggtggacaggacagtcagtcggttcatgctgccgatcgag
accgacatcaacaagcacggaaccgtactttacgaagtggtcgctgtcatcttcgtggcc
cagctgaaccacgtcgatctgaacctgaaggattgggtcaccatcgccctgacagcagcg
gcgtgcagcttcacagcagcggggatgccgtccagaggagccgcgaccactttctctgtg
ctaaccgtgctggggttacctgcaaaggaaacctccctcctcgtggtgatcgagtatttc
ctagaccgctgcaacaccgtcatcaacgtcttgggcgactgcatcggcgtgactctcgtt
gaccgggcgtcaaaaagagacctggaagtcctcgaggagctgggacagaaaatggaaagg
tggaacgacagtgatgctgaagcccggactccagatgagatcctggtccacatctctcgt
gataacaccatcagcacccccccacagctccgccgggaccaggaccagaaccaagaggac
tctggtcctgtgttcctgttcagcccaccagaatcttggtcggaccaaagcagcaatgcc
gacaccagcagcagtttccgcgttgctctgcgtcgccgcgctccggtcatggccgacgtg
cacgcgggtccgttgtctctgatcggtctggaggacgagctgacgtgcagcatctgcctg
agtcccttcgactgcccggtgaccatcccctgcggacacaacttctgccagggctgcctg
ctcgccgcctggaaggactcgtacagctgtcctcagtgtcggacccacttcgccaccaga
ccggagctgaagaagaacacggtgctcagcagcgtggtgcagagcttcaccctgaggaag
agcgaggaggatgacgtcatcgtacgttgtgactcgtgcatggaagcggaagcgtcgcag
acctgcctcacctgcatggcctcttactgcgaggagcacctgcggcctcaccgggacaac
cccgcctttcggctccaccagctgagccggcccctcggcgacctgtcggagcggatctgc
ccggaccaccacaagctgatggagcttttctgcagccagcacagccgtccgatctgcagc
ctctgcctccagcaggtgcacaagggctgccccttcatatcccccgaggagaggaggaac
ctgacagaggtgtgtgtgtatatgtgtgtacttgtacatctatctttgtggggaccgact
gttcaaccaaccatgtga
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