Pseudoliparis swirei (Mariana hadal snailfish): 130190354
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Entry
130190354 CDS
T09868
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03013
Nucleocytoplasmic transport
pswi03015
mRNA surveillance pathway
pswi03040
Spliceosome
pswi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130190354
09122 Translation
03013 Nucleocytoplasmic transport
130190354
03015 mRNA surveillance pathway
130190354
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130190354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130190354
03041 Spliceosome [BR:
pswi03041
]
130190354
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130190354
TREX complex
130190354
Spliceosome [BR:
pswi03041
]
Complex C
Other components
EJC/TREX
130190354
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130190354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
FYTT
Motif
Other DBs
NCBI-GeneID:
130190354
NCBI-ProteinID:
XP_056265693
LinkDB
All DBs
Position
24:28950397..28954451
Genome browser
AA seq
256 aa
AA seq
DB search
MADKMSMSLDDIIKLNKKGGGGGRGGGRSAGGQGGGSGRAGASRPARSRQNNFANNERNS
RATPYTRPRELPDRWQHDMFEEHTGGHRQSDAVERSVESNGKLVVSNLEFGVSDLDIKEL
FAEFGTLQKASVHYDRSGRSKGTADIHFETKAAALKAIKHYNGVPLDGRPMKIQQLTSED
DADSRPSTQSSNRGFDRSRLGQPKFERSERGERRQGGGGGGGGFRGRGRGGGNRPQLSAE
ELDAQLDAYNAKMDTS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaatgagtatgtctctggacgacatcatcaagctcaacaagaagggcgga
ggaggtggccgcggaggagggcgctcggccggcgggcagggtggcggttcgggtcgggcc
ggcgcgtcgaggccggcgcggagtcgacagaataacttcgccaacaatgagaggaacagc
cgcgcgacgccgtacacccggcccagagagctgccggacaggtggcagcatgacatgttc
gaggagcataccggtggccaccggcaaagtgatgcggtggagaggagcgtggaaagtaat
ggcaagctggtcgtttccaatctggaattcggagtctctgacttggatattaaggaattg
tttgccgagttcgggacattacagaaagcgtctgtgcactacgaccggtccggccgcagc
aaaggaaccgcggacatccacttcgaaacgaaggcggcagcacttaaagccattaagcac
tacaacggcgtcccgctcgacggccgccccatgaaaatccagcaactgacttcagaggac
gacgctgatagtagaccgtctacacaaagttcaaaccggggctttgaccgcagccggctg
ggacagccgaagtttgagaggagtgaacgaggcgagaggaggcaaggtggcggaggagga
ggaggaggcttcagaggtcgtggccgaggaggtggaaacagaccccagctctctgcagag
gagctggacgcccagttggatgcgtacaatgccaagatggacaccagctaa
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integrated database retrieval system
