Pseudoliparis swirei (Mariana hadal snailfish): 130190407
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Entry
130190407 CDS
T09868
Symbol
hmx1
Name
(RefSeq) homeobox protein HMX1
KO
K09349
homeobox protein Nkx-5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130190407 (hmx1)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
130190407 (hmx1)
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Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130190407
NCBI-ProteinID:
XP_056265782
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Position
24:26045637..26048327
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AA seq
281 aa
AA seq
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MQEKIKDNRTPTSSRASSFFIENLLGKGRNGLDGSRGAETGSGGRVLSAQLAEESAPPAA
GGSAVRSGDSPLQWYRGGAALNFRALETTHGPRDNTSPDDHCCSVSTGDRCSPAVSEPLT
EGSDEPDRKTADSHLTDDNEDAHTGCDASSSTRKKKTRTVFSRSQVFQLESTFDMKRYLS
SSERAGLAVSLHLTETQVKIWFQNRRNKWKRQLAADLEAAHIPHSSQRIVRVPILYHEGP
AAPSFNLNGLPLSGFSSCINYPLSSFAHSMSMLRSQMTGLV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaaaataaaggacaaccggactcccacttcgtcgagggcgtcgtcgtttttc
atcgagaacctcctggggaagggacggaatggactcgacgggagccgcggggcggagacc
ggctccggcggccgagtcctgagcgcgcagctcgcggaggagagcgctcctccggcggcc
ggcggctccgcggttcggtccggggactcgcctctccagtggtaccgcgggggagctgcc
ctcaacttcagagcgttggaaacgacacacggtccaagagacaacaccagcccagacgac
cactgctgctccgtgtccaccggtgaccggtgttcccccgccgtgtccgagcccctaacg
gagggcagcgacgaacccgaccggaagaccgccgacagccacctgacggacgacaacgag
gacgcgcacaccggctgcgacgcgtcttcctccacccggaagaagaagacccggacggtg
ttcagccgcagccaggtcttccagctggagtccaccttcgacatgaagcggtacctgagc
agctcggagagagcgggcctggcggtgtctctccacctgacggagacgcaggtcaaaatc
tggtttcagaaccggaggaataaatggaagaggcagctggcggcggacctggaggcggcg
cacatcccccactccagccagaggatcgtgagggtgcccatcttgtaccacgagggaccc
gccgcgccctccttcaacctgaacggactccctctgtcgggcttctccagctgcatcaat
tacccgctgtcctcgtttgctcactccatgagcatgttgagatcacagatgaccggcttg
gtgtga
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