Pseudoliparis swirei (Mariana hadal snailfish): 130190429
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Entry
130190429 CDS
T09868
Symbol
tbc1d9
Name
(RefSeq) TBC1 domain family member 9
KO
K19951
TBC1 domain family member 8/9
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130190429 (tbc1d9)
Membrane trafficking [BR:
pswi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130190429 (tbc1d9)
Endosome - Golgi transport
Rab GTPases and associated proteins
130190429 (tbc1d9)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
130190429
NCBI-ProteinID:
XP_056265814
LinkDB
All DBs
Position
24:8207196..8227482
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AA seq
1270 aa
AA seq
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MWVSPEDVLLAGALWITERANPYFILQKRKGHGDGGGGLAGLLVGTLDVVLDSSARMAPY
RILYLTPDSLVYWIIAHGTSRKEITEHWEWLEHNLLQTLSIFENENDITTFVKGKVQGII
AEYNKNHDVREDDDTDKFKEASSKFRKLFGMPEEEKLVNYYSCSFWKGKVPRQGWLYLSI
NHLCFYSYLLGKEAKLVVRWADITQLEKSATLLLPNAIKVSTRIHEHVFSVFLNIIETFK
LAEQLANIAMRQLLDNKGFEQDRSLPKLKKKSPKKVSALKRDLDARAKSECYRALFRLPK
DEKLDGHTDCTLWTPFNKMHILGQMFVSTNYICFTSKEETLCSLIIPLREVTIVEKADSS
NVLPSPLSISTKNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYLERELTGSLNSSDDEV
YSQSGSLLSSSPQHSSSSEGERTFNLNDRSVPTATQALMTMYRRRSPEEFNPKLAKEFLK
EQTWKNHFTEYGQGVCMYRTEKTKELVLKGIPESMRGDLWLLFSGAINEMATHPGYYEDL
VEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYCQAMNI
VTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELAREYVPQLYDCMQ
DLRVISTISLSWFLTLFLSVMPFESAVVVVDCFFYDGVKVIFQLALSVLHANIHQLLGCK
DDGEAMTVLGRYLDSVTNKDSTLPPIPHLHSLLTDNGEPHPDVDIFKLVRSSYEIFGSIR
ADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFSIDELEELYVLFKAEHLTSCYWG
GSSNPTERHDPSLPYLEQYRIDVEQFRGLFNLLFPWATGAYSDPLALRFFCLLDYNGDAL
INFREFINGLGVLYHGDLIEKLKLLYKMHVIPEITREPEEPDSAFEATRYFFEDITPETS
IGHNSKCRSEQDDGFVRVTFKTEKVKKLNTPEYRHYLKLWNQETKPELENTKNLPKLNQS
QFIELCKTLYSMFSEDVAEQELYHATATVTSLLLEMGEVGKLFSSSGRKDDGTEGQSEPS
MWTRDAIDPDPSREAVLDGPADGLAPAGLESQPSGGSERPPPMQDVKLEDSSPKDAGASS
AMLISDDETKDDTSMSSYSVLSAGSHELDEKLQCEDIADDTVLVRSCSGGGGRRRRRRSG
GRGLPRSTSVDNDWAITYEQFLASVLTEQALVRYFEKPVEVAARITNAKNVRKVGRALLS
TSDYEISLSG
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcagtcccgaagatgttttactggctggcgcattatggatcaccgagagagcg
aatccatatttcatcctccagaaacggaagggccacggggatggaggcggaggactggcg
ggcttgctggttggaaccctggatgtggtcttggactccagcgctcggatggccccatat
cggatcctgtacctgactcccgactctttagtttattggatcattgctcatggaacctcc
cgtaaagagatcaccgagcactgggagtggctggaacataacctgctgcagactctctcc
atctttgagaatgagaatgatattaccacctttgtcaaaggaaaagtccagggcatcatt
gcggagtataacaagaaccacgacgtcagagaggacgacgacacggacaagttcaaggag
gccagctccaagttccgtaagctgtttggaatgccggaggaggaaaagctggttaactat
tactcctgcagcttctggaagggcaaggtgccccgacagggatggctctacctcagcatc
aaccacctctgcttctactcctacttactcggaaaagaagccaaattggtggtgcgttgg
gcagatatcacccagctggagaaaagcgctaccctcctgctgcccaacgcaatcaaggtg
agcactcgcatccacgagcacgtcttctccgtcttcctcaacatcatcgagaccttcaag
ctggcggagcagctggccaacatcgccatgcgtcaactcctggacaacaaaggcttcgag
caggaccgctcgctgcccaagctcaagaagaagtcgcccaagaaggtgtcggcgctcaag
agggatttggatgcgagagcgaagagcgagtgttaccgggcgctcttccgtctgcccaaa
gatgaaaagctggacgggcacacagactgcaccctgtggacgcccttcaacaagatgcac
atcctgggacagatgtttgtttccaccaactacatctgcttcaccagcaaggaagagacg
ctgtgcagcctcattatcccgctacgagaggtgaccatcgtggagaaggcagacagttcc
aacgtgctgcccagcccgctctccatcagtaccaagaatcggatgacatttctgttcgct
aacctgaaggaccgagacttcctggtccagaggatttctgacttcctgcagcagaccacc
tctaagatctacctggagagggagcttactggcagcctaaacagctcagacgacgaggtt
tactcccagtctggatctctgctctccagtagcccccagcacagttcgagctcggaaggc
gagcgtacattcaacctgaacgaccgcagcgttcccacagccacacaagccctcatgacc
atgtaccggcgccgctctcctgaggagttcaatcccaagctggcgaaagagttcctgaag
gagcaaacatggaagaaccactttacagagtacggacagggagtgtgtatgtaccgcacg
gagaagacaaaggagctggtcctcaaggggattcctgagagcatgcgaggagatctctgg
cttctcttctctggggcgatcaacgagatggccacccaccccgggtactacgaagacctg
gtggaaaagtcgatgggcaaatacaacctggcaaccgaggagatcgagcgggacctgcac
cgctccctgcccgagcaccccgccttccagaacgagatgggcatcgccgccctgcgcagg
gtcctcaccgcctacgcattcagaaaccccaacatcggatactgccaggctatgaatatt
gtgacatctgtgttgctgctctacgctaaagaagaggaggctttctggctgcttgtggca
ctctgcgagaggatgctgcccgactactacaacactagggttgtcggggccctcgtcgat
cagggggtgttcgaggagctcgcccgcgagtacgttccccagctgtacgactgcatgcag
gacctcagggtcatctccaccatctccctctcctggttcctcaccctcttcctgtccgtc
atgcccttcgagagcgcggttgtggtggtggactgcttcttctacgacggcgtcaaggtc
atcttccagctggcgctctccgtgctgcacgccaacatccaccagctgctgggctgcaag
gacgacggagaggccatgacggtactgggcagatacttggacagtgtcaccaataaggac
agcaccctcccgcccatcccccacctgcactcgttactgacagacaacggagaaccgcat
ccagacgtcgacatctttaaactagtccgcagctcctacgagattttcggttcaatccgt
gcggatgtgattgaacagatgcgtttcaaacagagactgagggtcatccaaaccattgaa
gatacaactaaacgcaacgtggtcaggactattgtaacagagactgccttcagcattgac
gagctggaggagctttatgtgctcttcaaggcggagcacctgaccagctgttactggggc
ggcagcagcaaccccacggagcgccacgaccccagcctgccctacctggagcagtaccgc
atcgacgtggagcagttcagaggcctgttcaacctgctgttcccctgggccaccggggcc
tactcggaccccctggctttgcgcttcttctgtctccttgactataacggagatgccctc
atcaattttcgggagttcatcaatggcctgggtgtcctgtatcacggtgacctcattgag
aagctgaagctgctctacaagatgcatgtcatacctgaaatcactcgtgaaccagaagag
ccggactcggccttcgaggccacgcggtacttctttgaagacatcactccagaaacatcc
atcggtcacaattcaaagtgcagaagcgagcaggatgatggctttgtcagagtcacattt
aagactgaaaaagtgaagaaactgaatactcctgaatatcggcattacttgaaactgtgg
aaccaggagacgaaacctgaactagaaaacacaaaaaacctccccaagctgaatcagagc
cagttcatcgagctttgtaagaccctctacagcatgttcagcgaggatgtagcagaacag
gagctctatcacgccacggcgacggtcaccagtctgctgctggaaatgggagaagtgggg
aagctcttctcctcctctggccggaaggatgacggcacggagggtcagtcagagccgagc
atgtggacgcgagacgccatcgaccccgaccccagccgggaggccgtgctcgacggtccc
gctgacggcttggcccccgcaggtctggagagccagccgagcggagggagcgagcggccg
ccgccgatgcaagacgtcaagctggaggactcgtctcccaaagacgcgggcgcctcatcc
gccatgctcatctcggatgacgaaaccaaagacgacacgtcgatgtcctcttactccgtg
ctcagcgccggctctcatgagctggacgagaagctgcagtgcgaggacatcgccgacgac
acggtgctggtgcgcagctgctccggcggcggaggaagacgacgacgacgaagaagcggc
ggccgagggctgcctcgcagcacgagcgtcgataacgattgggccatcacgtatgagcag
ttcctggcctccgtgctcaccgagcaggccctggtgcgttatttcgagaagccggtggag
gtggcggctcgaataaccaacgccaagaacgtgcgtaaagtcgggcgcgcccttctctcg
acgagtgactatgagatctcgctatctggctga
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