Pseudoliparis swirei (Mariana hadal snailfish): 130190450
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Entry
130190450 CDS
T09868
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130190450
Enzymes [BR:
pswi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130190450
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130190450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Ferritin
BNIP2
Motif
Other DBs
NCBI-GeneID:
130190450
NCBI-ProteinID:
XP_056265850
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All DBs
Position
24:25305798..25313583
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AA seq
647 aa
AA seq
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MRGGSSYGDRGRDRPRFGATNSRGGPPPMKFGNPGDRLRKKKWNMDELPKFEKNFYVEHP
EVQRMSQLDMEEFCRKKEITIRGTGCPRAIPAFHQAQFPQHVMDVLSQQNFKEPTAIQCQ
GFPVALSGRDMVGIAQTGSGKTLSYLLPSIVHINHQPYLERGDGPICLVLAPTRELAQQV
QQVAYEYGRASRIKTTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCT
YLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKDVRQLAEDFLRDHIQINIG
ALELSANHNILQIVDVCNENEKDHKLFQLMEEIMAEKENKTIVFVETKKRCDDLTRRMRR
QGWPAMCIHGDKSQPERDWVLIEFRSGKAPILVATDVASRGLDVEDIKFVINYDYPNSSE
DYVHRIGRTARSSNKGTAYTFFTPGNLRQARDLVRVLAEARQAINPKLLQFVESGRGGGG
GGGRMRYRASSSSTNSNQFQRPSDRSMGGGSSGGGGSSGGGSSSSKDGRSSFGRDSHSSH
ATSSFRDRGRDQRSGGGGSDQYQSYGSGAAGGGTGFNSRNGGPDKPSQPQSQFSQPLAPP
SLAGGLPSLMTHQFAAQQQALLGFGPQAPYPFVAPPPPPPGAQLPRK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggggttcttcctacggcgaccgcggacgagacaggccacggtttggggccacg
aacagtcgcggtggaccgccgccaatgaagtttgggaatccaggcgaccgtctacgcaag
aagaaatggaacatggacgagcttccgaaatttgagaagaacttctacgttgaacaccct
gaggtgcaacgcatgagtcagcttgacatggaagagttctgcagaaagaaggagatcacc
atcagaggcactggctgtccaagggcgatccctgcctttcaccaggcgcagtttccccag
catgtgatggatgtgctgtcacagcagaacttcaaggagccgacagcgatccagtgtcaa
ggcttccctgtggccctgagtgggagggacatggtggggatcgcacagactggctccgga
aagacgctgtcttatcttcttccttctattgtacacatcaaccaccagccctacctggag
aggggagatggcccaatttgtctggtgttggccccgacgagagagctggcccagcaggtc
caacaggtcgcatatgaatatggcagagcttcccgtatcaaaaccacctgtgtctacggc
ggagcacccaaaggaccacagatccgagacctcgagaggggtgttgagatatgtatcgcc
acacctggtcgcctcatcgacttcctggagagtggcaaaacgaacctgcggcgctgcacc
tacctggtgctggatgaggcggaccgcatgctggacatgggctttgagccccagattcgc
aagattgtcgaacaaatcagacctgatagacagactctgatgtggagcgcgacctggccg
aaggatgttcggcagctcgcggaggacttcctgagggaccacatccagattaacatcggc
gctctggagctcagcgccaaccacaacatcctgcagatagtcgacgtctgcaatgagaat
gaaaaggaccacaaactgtttcagctgatggaggagatcatggccgagaaagagaacaaa
accatcgtctttgtggagacgaagaagcgctgtgatgatctcaccaggaggatgaggcgg
caaggctggccagccatgtgtatccatggagacaagagccagccagaaagagattgggta
ctcattgaatttcggagtggtaaagctcccatcctggttgctaccgacgtggcctcccgt
ggtctggatgtggaagacatcaagttcgtcatcaactatgactatcccaattcctccgag
gactacgtccaccgcatcggacgtacggcgcgcagctccaacaaggggacggcctacacc
ttcttcaccccggggaacctgcggcaggcgcgagacctggtccgggttctggcggaggcc
cggcaggccatcaaccccaaactgctccagttcgtggagtcggggcgcggcggcggaggc
ggcggtggcaggatgcgttaccgtgccagcagcagctccaccaactccaaccagttccag
aggccaagtgatcgcagcatgggcggcggcagtagcggcggcggcggaagcagcggcggc
ggcagcagcagcagcaaggacggccgcagtagcttcggccgcgacagccacagcagccac
gccacttcctctttcagggacagaggccgagatcaaaggagcggcggcggcggctcggat
cagtaccagagttacggctccggcgcggccgggggcggaaccggcttcaactcccgcaac
ggaggtccggataagcccagccagccgcagagccagttcagccagccgctcgccccgcct
tcattggccggggggctgccgtctctgatgacccatcagttcgcagcgcagcagcaagcg
ctcctgggcttcgggccgcaagcgccgtacccgtttgttgccccgccccctccccctccg
ggcgctcaacttcccaggaagtag
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